BooksBusch, D.E., and J.C. Trexler. 2003. Monitoring Ecosystems: Interdisciplinary Approaches for Evaluating Ecoregional Initiatives. Island Press : Washington, D.C..
Book ChaptersOgden, L.A., J.C. Trexler, D.L. Childers, E.E. Gaiser, and K.Z.S. Schwartz. 2019. Chapter 2: The Everglades as Icon, in Childers, D.L., E.E. Gaiser and L.A. Ogden (eds.) The Coastal Everglades: The Dynamics of Social-Ecological Transformation in the South Florida Landscape. Oxford University Press : New York, New York.
Sklar, F.H., J.M. Beerens, L.A. Brandt, C. Coronado-Molina, S.E. Davis, T.A. Frankovich, C.J. Madden, A. Mclean, J.C. Trexler, and W. Wilcox. 2019. Chapter 8: Back to the Future - Rebuilding the Everglades, in Childers, D.L., E.E. Gaiser and L.A. Ogden (eds.) The Coastal Everglades: The Dynamics of Social-Ecological Transformation in the South Florida Landscape. Oxford University Press : New York, New York.
Trexler, J.C., and W.F. Loftus. 2016. Invertebrates of the Florida Everglades, pp. 321-356 in Batzer, D. and D. Boix (eds.) Invertebrates in Freshwater Wetlands. Springer International Publishing.
Gaiser, E.E., A.D. Gottlieb, S.S. Lee, and J.C. Trexler. 2015. The Importance of Species-Based Microbial Assessment of Water Quality in Freshwater Everglades Wetlands, pp. 115-130 in Entry, J., K. Jayachandran, A.D. Gottlieb and A. Ogram (eds.) Microbiology of the Everglades Ecosystem. CRC Press : Boca Raton, Florida.
Trexler, J.C., E.E. Gaiser, J. Kominoski, and J.L. Sanchez. 2015. The Role of Periphyton Mats in Consumer Community Structure and Function in Calcareous Wetlands: Lessons from the Everglades, pp. 155-179 in Entry, J., K. Jayachandran, A.D. Gottlieb and A. Ogram (eds.) Microbiology of the Everglades Ecosystem. CRC Press : Boca Raton, Florida.
Gaiser, E.E., J.C. Trexler, and P. Wetzel. 2012. The Florida Everglades, pp. 231-252 in Batzer, D. and A. Baldwin (eds.) Wetland Habitats of North America: Ecology and Conservation Concerns. University of California Press : Berkeley.
Jopp, F., D.L. DeAngelis, and J.C. Trexler. 2011. Chapter 18. Trophic Cascades and Food Web Stability in Fish Communities of the Everglades, pp. 257-268 in Jopp, F., H. Reuter and B. Breckling (eds.) Modelling Complex Ecological Dynamics- An Introduction into Ecological Modeling for Students, Teachers & Scientists. Springer-Verlag : Berlin, Heidelberg.
Trexler, J.C., D.L. DeAngelis, and J. Jiang. 2011. Community assembly and mode of reproduction: predicting the distribution of livebearing fishes, in Evans, J., A. Pilastro and I. Schlupp (eds.) Ecology and Evolution of Poeciliid Fishes. University of Chicago Press : Chicago, IL.
DeAngelis, D.L., J.C. Trexler, and D.D. Donalson. 2010. Competition dynamics in a seasonally varying wetland, pp. 1-14 in Cantrell, S., C. Cosner and S. Ruan (eds.) Spatial Ecology. Chapman Hall/CRC Press : Boca Raton, FL.
Trexler, J.C., and D.L. DeAngelis. 2010. Modeling the evolution of complex reproductive adaptations in poeciliid fishes: Matrotrophy and superfetation, pp. 231-240 in Uribe, M.C. and H.J. Greer (eds.) Viviparous Fishes II. New Life Publications : Homestead, FL.
Trexler, J.C., and D.E. Busch. 2003. Monitoring, assessment, and ecoregional initiatives: a synthesis, pp. 405-424 in Busch, D.E. and J.C. Trexler (eds.) Monitoring Ecosystems: Interdisciplinary Approaches for Evaluating Ecoregional Initiatives. Island Press : Washington, D.C..
Trexler, J.C., W.F. Loftus, and J. Chick. 2003. Setting and monitoring restoration goals in the absence of historical data: The case of fishes in the Florida Everglades, pp. 351-376 in Busch, D.E. and J.C. Trexler (eds.) Monitoring Ecosystems: Interdisciplinary Approaches for Evaluating Ecoregional Initiatives. Island Press : Washington, D.C..
Journal ArticlesGatto, J., J. Kline, and J.C. Trexler. 2024. A case study of sequential colonization: intra- and interspecific patterns of recovery in a hydrologically pulsed ecosystem. Environmental Biology of Fishes DOI: 10.1007/s10641-024-01535-0.
Flood, P.J., W.F. Loftus, and J.C. Trexler. 2023. Fishes in a seasonally pulsed wetland show spatiotemporal shifts in diet and trophic niche but not shifts in trophic position. Food Webs 34: e00265.
Pintar, M.R., N.J. Dorn, J. Kline, and J.C. Trexler. 2023. Hydrology-mediated ecological function of a large wetland threatened by an invasive predator. Science of The Total Environment 857: 159245.
Pintar, M.R., N.J. Dorn, J. Kline, and J.C. Trexler. 2023. Contrasting invasion histories and effects of three non-native fishes observed with long-term monitoring data. Biological Invasions 25: 3887-3903.
Strickland, B.A., P.J. Flood, J. Kline, F.J. Mazzotti, M.R. Heithaus, and J.C. Trexler. 2023. An apex predator engineers wetland food-web heterogeneity through nutrient enrichment and habitat modification. Journal of Animal Ecology 92: 1388-1403.
Ruehl, C., M.R. Pintar, and J.C. Trexler. 2022. Predator-permanence hypothesis in time: Community dynamics in a seasonally flooded wetland. Freshwater Science 41: 549-696.
Gatto, J., J. Kline, W.F. Loftus, and J.C. Trexler. 2021. Linking demographic transitions to population dynamics in a fluctuating environment. Canadian Journal of Fisheries and Aquatic Sciences 78: 797-808.
Pintar, M.R., J. Kline, and J.C. Trexler. 2021. The aquatic Heteroptera (Hemiptera) of marshes in the Florida Everglades. Florida Entomologist 104: 307-319.
Flood, P.J., A. Duran, M. Barton, A.E. Mercado-Molina, and J.C. Trexler. 2020. Invasion impacts on functions and services of aquatic ecosystems. Hydrobiologia DOI: 10.1007/s10750-020-04211-3.
Gatto, J., and J.C. Trexler. 2020. Speed and directedness predict colonization sequence post-disturbance. Oecologia 193: 713-727.
Gatto, J., and J.C. Trexler. 2019. Seasonality of fish recruitment in a pulsed floodplain ecosystem: Estimation and hydrological controls. Environmental Biology of Fishes 102: 595-613.
Parkos, J.J.III, J. Kline, and J.C. Trexler. 2019. Signal from the noise: model-based interpretation of variable correspondence between active and passive samplers. Ecosphere 10: e02858.
Sanchez, J.L., H.D. Bracken-Grissom, and J.C. Trexler. 2019. Freshwater-to-marine transitions may explain the evolution of herbivory in the subgenus Mollienesia (genus Poecilia, mollies and guppies). Biological Journal of the Linnean Society 127: 742-761.
Sanchez, J.L., and J.C. Trexler. 2018. When is an herbivore not an herbivore? Detritivory facilitates herbivory in a freshwater system. Ecology and Evolution 8: 5977-5991.
Beerens, J.M., J.C. Trexler, and C.P. Catano. 2017. Predicting wading bird and aquatic faunal responses to ecosystem restoration scenarios. Restoration Ecology 25: S86-S98.
Botson, B.B., D.E. Gawlik, and J.C. Trexler. 2016. Mechanisms that generate resource pulses in a fluctuating wetland. PLoS ONE 11: e0158864.
Sanchez, J.L., and J.C. Trexler. 2016. The adaptive evolution of herbivory in freshwater systems. Ecosphere 7: e01414.
Venne, L.S., J.C. Trexler, and P.C. Frederick. 2016. Prescribed burn creates pulsed effects on a wetland aquatic community. Hydrobiologia 771: 281-295.
Yurek, S., D.L. DeAngelis, J.C. Trexler, J.A. Klassen, and L. Larsen. 2016. Persistence and diversity of directional landscape connectivity improves biomass pulsing in simulations of expanding and contracting wetlands. Ecological Complexity 28: 1-11.
Catano, C.P., S.S. Romanach, J.M. Beerens, L. Pearlstine, L.A. Brandt, K.M. Hart, F.J. Mazzotti, and J.C. Trexler. 2015. Using scenario planning to evaluate the impacts of climate change on wildlife populations and communities in the Florida Everglades. Environmental Management 55: 807-823.
Ruehl, C., and J.C. Trexler. 2015. Reciprocal transplant reveals trade-off of resource quality and predation risk in the field
. Oecologia 179: 117-127.
Gaiser, E.E., P. Sullivan, F. Tobias, A. Bramburger, and J.C. Trexler. 2014. Boundary effects on benthic microbial phosphorus concentrations and diatom beta diversity in a hydrologically-modified, nutrient-limited wetland. Wetlands 34: 55-64.
Goss, C., W.F. Loftus, and J.C. Trexler. 2014. Seasonal fish dispersal in ephemeral wetlands of the Florida Everglades. Wetlands 34: 147-157.
Harrison, E., J.C. Trexler, T.M. Collins, E. Vazquez-Dominguez, U. Razo-Mendivil, W.A. Matamoros, and C. Barrientos. 2014. Genetic evidence for multiple sources of the non-native fish Cichlasoma urophthalmus (Günther; Mayan Cichlids) in southern Florida. PLoS ONE 9: e104173.
Kline, J., W.F. Loftus, K. Kotun, J.C. Trexler, J.S. Rehage, J.J. Lorenz, and M. Robinson. 2014. Recent fish introductions into Everglades National Park: An unforeseen consequence of water management? Wetlands 34: 175-187.
Mukherjee, S., M.R. Heithaus, J.C. Trexler, J. Ray-Mukherjee, and J.J. Vaudo. 2014. Perceived risk of predation affects reproductive life-history traits in Gambusia holbrooki, but not in Heterandria formosa. PLoS ONE 9: e88832.
Sokol, E.R., J.M. Hoch, E.E. Gaiser, and J.C. Trexler. 2014. Metacommunity structure along resource and disturbance gradients in Everglades wetlands. Wetlands 34: 135-146.
Abbey-Lee, R., E.E. Gaiser, and J.C. Trexler. 2013. Relative roles of dispersal dynamics and competition in determining the isotopic niche breadth of a wetland fish. Freshwater Biology 58: 780-792.
Apodaca, J.J., J.C. Trexler, N. Jue, M. Schrader, and J. Travis. 2013. Large-scale natural disturbance alters genetic population structure of the sailfin molly, Poecilia latipinna. The American Naturalist 181: 254-263.
Banet, A.I., and J.C. Trexler. 2013. Space-for-time substitution works in Everglades ecological forecasting models. PLoS ONE 8: e81025.
Giacomini, H.C., D.L. DeAngelis, J.C. Trexler, and M. PetrereJr.. 2013. Trait contributions to fish community assembly emerge from trophic interactions in an individual-based model. Ecological Modelling 251: 32-43.
Harrison, E., J. Lorenz, and J.C. Trexler. 2013. Per capita effects of non-native Mayan Cichlids (Cichlasoma urophthalmus; Gunther) on native fish in the estuarine southern Everglades. Copeia 2013: 80-96.
Lee, S.S., E.E. Gaiser, and J.C. Trexler. 2013. Diatom-based models for inferring hydrology and periphyton abundance in a subtropical karstic wetland: Implications for ecosystem-scale bioassessment. Wetlands 33: 157-173.
Ruehl, C., and J.C. Trexler. 2013. A suite of prey traits determine predator and nutrient enrichment effects in a tri-trophic food web. Ecosphere 4: 75.
Yurek, S., D.L. DeAngelis, J.C. Trexler, F. Jopp, and D.D. Donalson. 2013. Simulating mechanisms for dispersal, production and stranding of small forage fish in temporary wetland habitats. Ecological Modelling 250: 391-401.
Belicka, L., E.R. Sokol, J.M. Hoch, R. Jaffe, and J.C. Trexler. 2012. A molecular and stable isotopic approach to investigate the importance of algal and detrital energy pathways in a freshwater marsh. Wetlands 32: 531-542.
McElroy, T.C., K.L. Kandl, and J.C. Trexler. 2012. Temporal population genetic structure of Eastern Mosquitofish in a dynamic aquatic landscape. Journal of Heredity 102: 678-687.
Obaza, A., D.L. DeAngelis, and J.C. Trexler. 2011. Using data from an encounter sampler to model fish dispersal. Journal of Fish Biology 78: 495-513.
Parkos, J.J.III, C.R. RuetzIII, and J.C. Trexler. 2011. Disturbance regime and limits on benefits of refuge use for fishes in a fluctuating hydroscape. Oikos 120: 1519-1530.
Ruehl, C., and J.C. Trexler. 2011. Comparison of snail density, standing stock, and body size between Caribbean karst wetlands and other freshwater ecosystems. Hydrobiologia 665: 1-13.
Sargeant, B., E.E. Gaiser, and J.C. Trexler. 2011. Indirect and direct controls of macroinvertebrates and small fish by abiotic factors and trophic interactions in the Florida Everglades. Freshwater Biology 56: 2334-2346.
DeAngelis, D.L., J.C. Trexler, C. Cosner, A. Obaza, and F. Jopp. 2010. Fish population dynamics in a seasonally varying wetland. Ecological Modelling 221: 1131-1137.
Jopp, F., D.L. DeAngelis, and J.C. Trexler. 2010. Modeling seasonal dynamics of small fish cohorts in fluctuating freshwater marsh landscapes. Landscape Ecology 25: 1041-1054.
Sargeant, B., E.E. Gaiser, and J.C. Trexler. 2010. Biotic and abiotic determinants of intermediate-consumer trophic diversity in the Florida Everglades. Marine & Freshwater Research 61: 11-22.
Doren, R.F., J.C. Trexler, A.D. Gottlieb, and M. Harwell. 2009. Ecological indicators for system-wide assessment of the Greater Everglades Ecosystem Restoration Program. Ecological Indicators 9: S2-S16.
Trexler, J.C., and C. Goss. 2009. Aquatic fauna as indicators for Everglades restoration: Applying dynamic targets in assessments. Ecological Indicators 9: S108-S119 .
Gaiser, E.E., R.F. Doren, P. McCormick, S. Newman, J.H. Richards, and J.C. Trexler. 2008. Comment on "Estimating ecological thresholds for phosphorus in the Everglades". Environmental Science & Technology 42: 6770-6771.
Liston, S.E., S. Newman, and J.C. Trexler. 2008. Macroinvertebrate community response to eutrophication in an oligotrophic wetland: An in situ mesocosm experiment. Wetlands 28: 686-694.
Dorn, N.J., and J.C. Trexler. 2007. Crayfish assemblage shifts in a large drought-prone wetland: the roles of hydrology and competition. Freshwater Biology 20: 113-115.
Dorn, N.J., J.C. Trexler, and E.E. Gaiser. 2006. Exploring the role of large predators in marsh food webs: evidence for a behaviorally-mediated trophic cascade. Hydrobiologia 569: 375-386.
Gaiser, E.E., J.H. Richards, J.C. Trexler, R.D. Jones, and D.L. Childers. 2006. Periphyton responses to eutrophication in the Florida Everglades: Cross-system patterns of structural and compositional change. Limnology and Oceanography 51: 617-630.
Green, D., J.C. Trexler, J.J. Lorenz, C.C. McIvor, and T.E. Philippi. 2006. Spatial patterns of fish communities along two estuarine gradients in southern Florida . Hydrobiologia 569: 387-399.
Rehage, J.S., and J.C. Trexler. 2006. Assessing the net effect of anthropogenic disturbance on aquatic communities in wetlands: Community structure relative to distance from canals. Hydrobiologia 569: 359-373.
Trexler, J.C., E.E. Gaiser, and D.L. Childers. 2006. Interaction of hydrology and nutrients in controlling ecosystem function in oligotrophic coastal environments of South Florida. Hydrobiologia 569: 1-2.
Williams, A.J., and J.C. Trexler. 2006. A preliminary analysis of the correlation of food-web characteristics with hydrology and nutrient gradients in the southern Everglades. Hydrobiologia 569: 493-504.
DeAngelis, D.L., J.C. Trexler, and W.F. Loftus. 2005. Life history trade-offs and community dynamics of small fishes in a seasonally pulsed wetland. Canadian Journal of Fisheries and Aquatic Sciences 62: 781-790.
Gaiser, E.E., J.C. Trexler, J.H. Richards, D.L. Childers, D. Lee, A.L. Edwards, L.J. Scinto, K. Jayachandran, G.B. Noe, and R.D. Jones. 2005. Cascading ecological effects of low-level phosphorus enrichment in the Florida Everglades. Journal of Environmental Quality 34: 717-723.
Liston, S.E., and J.C. Trexler. 2005. Spatiotemporal patterns in community structure of macroinvertebrates inhabiting calcareous periphyton mats. Journal of the North American Benthological Society 24: 832-844.
Trexler, J.C., W.F. Loftus, and S. Perry. 2005. Disturbance frequency and community structure in a twenty-five year intervention study. Oecologia 145: 140-152.
Chick, J., and J.C. Trexler. 2004. Spatial scale and abundance patterns of large fish communities in freshwater marshes of the Florida Everglades. Wetlands 24: 652-664.
Noe, G.B., D.L. Childers, A.L. Edwards, E. Gaiser, K. Jayachandran, D. Lee, J. Meeder, J. Richards, L.J. Scinto, J.C. Trexler, and R.D. Jones. 2002. Short-term changes in phosphorus storage in an oligotrophic Everglades wetland ecosystem receiving experimental nutrient enrichment. Biogeochemistry 59: 239-267.