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Books (8)

Chandler, D., K. Grove, and S. Wakefield. 2020. Resilience in the Anthropocene: Governance and Politics at the End of the World. Routledge.

Childers, D.L., E.E. Gaiser, and L.A. Ogden. 2019. The Coastal Everglades: The Dynamics of Social-Ecological Transformation in the South Florida Landscape. Oxford University Press : New York, New York.

Rivera-Monroy, V.H., S.Y. Lee, E. Kristensen, and R.R. Twilley. 2017. Mangrove Ecosystems: A Global Biogeographic Perspective Structure, Function and Services. Springer International Publishing : Cham, Switzerland.

Larsen, Laurel , andJoyce Mihran Turley. 2012. One Night in the Everglades. Moonlight Publishing, Taylor Trade Publishing : New York.

Ogden, L.A.. 2011. Swamplife: People, Gators, and Mangroves Entangled in the Everglades. University of Minnesota Press : Minneapolis, MN.

Simmons, G., and L.A. Ogden. 2010. Gladesmen: Gator Hunters, Moonshiners, and Skiffers. University of Florida Press : Gainesville, FL.

Hollander, G.. 2008. Raising Cane in the Glades: The Global Sugar Trade and the Transformation of Florida. The University of Chicago Press : Chicago.

Busch, D.E., and J.C. Trexler. 2003. Monitoring Ecosystems: Interdisciplinary Approaches for Evaluating Ecoregional Initiatives. Island Press : Washington, D.C..

Book Chapters (67)

Gaiser, E.E.. 2024. Using diatoms to guide successful ecological restoration, pp. 1-39 in Maidana, N.I., M. Licursi and E. Morales (eds.) Diatom Ecology: Molecule to Metacommunities. John Wiley & Sons : Hoboken, New Jersey.

Kominoski, J., S.K. Chapman, W. Dodds, J.J. Follstad Shah, and J.P. Richardson. 2021. Causes and Consequences of Changes in Riparian Vegetation for Plant Litter Decomposition Throughout River Networks, pp. 273-296 in Swan, C.M., L. Boyero and C. Canhoto (eds.) The Ecology of Plant Litter Decomposition in Stream Ecosystems. Springer : Cham.

Lopez-Sanchez, J.M., J.D. Ballester-Berman, F. Vicente-Guijalba, S.R. Cloude, H. McNairn, J. Shang, H. Skriver, T. Jagdhuber, I. Hajnsek, E. Pottier, C. Marechal, L. Hubert-Moy, S. Corgne, S. Wdowinski, R. Touzi, G. Gosselin, R. Brooks, Y. Yamaguchi, and G. Singh. 2021. Agriculture and Wetland Applications, pp. 119-178 in Hajnsek, I. and Y.L. Desnos (eds.) Polarimetric Synthetic Aperture Radar. Springer : Cham.

Waide, R., and K. Vanderbilt. 2021. Understanding the Fundamental Principles of Ecosystems through a Global Network of Long-Term Ecological Research Sites, in Waide, R. and S.E. Kingsland (eds.) The Challenges of Long-Term Ecological Research: A Historical Analysis. Springer : Cham.

Grove, K., and A. Barnett. 2020. Destituting resilience: contextualizing and contesting science for the Anthropocene, in Chandler, D., K. Grove and S. Wakefield (eds.) Resilience in the Anthropocene: Governance and Politics at the End of the World. Routledge.

Wakefield, S., K. Grove, and D. Chandler. 2020. Introduction: the power of life, in Chandler, D., K. Grove and S. Wakefield (eds.) Resilience in the Anthropocene: Governance and Politics at the End of the World. Routledge.

Childers, D.L., E.E. Gaiser, and L.A. Ogden. 2019. Preface, in Childers, D.L., E.E. Gaiser and L.A. Ogden (eds.) The Coastal Everglades: The Dynamics of Social-Ecological Transformation in the South Florida Landscape. Oxford University Press : New York, New York.

Childers, D.L., E.E. Gaiser, and L.A. Ogden. 2019. Chapter 1, in Childers, D.L., E.E. Gaiser and L.A. Ogden (eds.) The Coastal Everglades: The Dynamics of Social-Ecological Transformation in the South Florida Landscape. Oxford University Press : New York, New York.

Davis, S.E., E. Castañeda-Moya, R. Boucek, R.M. Chambers, L. Collado-Vides, H.C. Fitz, J.D. Fuentes, E.E. Gaiser, M.R. Heithaus, J.S. Rehage, V.H. Rivera-Monroy, J.P. Sah, F.H. Sklar, and T. Troxler. 2019. Chapter 7: Exogenous Drivers - What has Disturbance Taught Us?, in Childers, D.L., E.E. Gaiser and L.A. Ogden (eds.) The Coastal Everglades: The Dynamics of Social-Ecological Transformation in the South Florida Landscape. Oxford University Press : New York, New York.

Gaiser, E.E., L.A. Ogden, D.L. Childers, and C. Hopkinson. 2019. Chapter 9: Re-Imagining Ecology through an Everglades Lens, in Childers, D.L., E.E. Gaiser and L.A. Ogden (eds.) The Coastal Everglades: The Dynamics of Social-Ecological Transformation in the South Florida Landscape. Oxford University Press : New York, New York.

Kominoski, J., J.S. Rehage, W.T. Anderson, R. Boucek, H.O. Briceno, M.R. Bush, T.W. Dreschel, M.R. Heithaus, R. Jaffe, L. Larsen, P. Matich, C. McVoy, A.E. Rosenblatt, and T. Troxler. 2019. Chapter 4: Ecosystem Fragmentation and Connectivity - Legacies and Future Implications of a Restored Everglades, in Childers, D.L., E.E. Gaiser and L.A. Ogden (eds.) The Coastal Everglades: The Dynamics of Social-Ecological Transformation in the South Florida Landscape. Oxford University Press : New York, New York.

Ogden, L.A., J.C. Trexler, D.L. Childers, E.E. Gaiser, and K.Z.S. Schwartz. 2019. Chapter 2: The Everglades as Icon, in Childers, D.L., E.E. Gaiser and L.A. Ogden (eds.) The Coastal Everglades: The Dynamics of Social-Ecological Transformation in the South Florida Landscape. Oxford University Press : New York, New York.

Price, R.M., K.Z.S. Schwartz, W.T. Anderson, R. Boucek, H.O. Briceno, M.I. Cook, H.C. Fitz, M.R. Heithaus, J. Onsted, J.S. Rehage, V.H. Rivera-Monroy, R. Roy Chowdhury, and A.K. Saha. 2019. Chapter 3: Water, Sustainability, and Survival, in Childers, D.L., E.E. Gaiser and L.A. Ogden (eds.) The Coastal Everglades: The Dynamics of Social-Ecological Transformation in the South Florida Landscape. Oxford University Press : New York, New York.

Rivera-Monroy, V.H., J. Cattelino, J. Wozniak, K.Z.S. Schwartz, G.B. Noe, E. Castañeda-Moya, G. Koch, J.N. Boyer, and S.E. Davis. 2019. Chapter 5: The Life of P: A Biogeochemical and Sociopolitical Challenge in the Everglades, in Childers, D.L., E.E. Gaiser and L.A. Ogden (eds.) The Coastal Everglades: The Dynamics of Social-Ecological Transformation in the South Florida Landscape. Oxford University Press : New York, New York.

Sklar, F.H., J.F. Meeder, T. Troxler, T.W. Dreschel, S.E. Davis, and P.L. Ruiz. 2019. Chapter 16 - The Everglades: At the Forefront of Transition, pp. 277-292 in Wolanski, E., J.W. Day, M. Elliott and R. Ramachandran (eds.) Coasts and Estuaries: The Future. Elsevier.

Sklar, F.H., J.M. Beerens, L.A. Brandt, C. Coronado-Molina, S.E. Davis, T.A. Frankovich, C.J. Madden, A. Mclean, J.C. Trexler, and W. Wilcox. 2019. Chapter 8: Back to the Future - Rebuilding the Everglades, in Childers, D.L., E.E. Gaiser and L.A. Ogden (eds.) The Coastal Everglades: The Dynamics of Social-Ecological Transformation in the South Florida Landscape. Oxford University Press : New York, New York.

Troxler, T., G. Starr, J.N. Boyer, J.D. Fuentes, R. Jaffe, S.L. Malone, J.G. Barr, S.E. Davis, L. Collado-Vides, J.L. Breithaupt, A.K. Saha, R.M. Chambers, C.J. Madden, J.M. Smoak, J.W. Fourqurean, G. Koch, J. Kominoski, L.J. Scinto, S. Oberbauer, V.H. Rivera-Monroy, E. Castañeda-Moya, N.O. Schulte, S.P. Charles, J.H. Richards, D.T. Rudnick, and K.R.T. Whelan. 2019. Chapter 6: Carbon Cycles in the Florida Coastal Everglades Social-Ecological System across Scales, in Childers, D.L., E.E. Gaiser and L.A. Ogden (eds.) The Coastal Everglades: The Dynamics of Social-Ecological Transformation in the South Florida Landscape. Oxford University Press : New York, New York.

Twilley, R.R., V.H. Rivera-Monroy, A. Rovai, E. Castañeda-Moya, and S.E. Davis. 2019. Chapter 21 - Mangrove Biogeochemistry at Local to Global Scales using Ecogeomorphic Approaches, pp. 717-785 in Perillo, G.M.E., E. Wolanski, D.R. Cahoon and M.M. Brinson (eds.) Coastal Wetlands: An Integrated Ecosystem Approach. Elsevier.

Uchida, E., V.H. Rivera-Monroy, S.A. Ates, E. Castañeda-Moya, A. Gold, T. Guilfoos, M.F. Hernandez, R. Lokina, M.M. Mangora, S.R. Midway, C. McNally, M.J. Polito, M. Robertson, R.V. Rohli, H. Uchida, L. West, and X. Zhao. 2019. Collaborative Research Across Boundaries: Mangrove Ecosystem Services and Poverty Traps as a Coupled Natural-Human System, pp. 115-152 in Perz, S.G. (eds.) Collaboration Across Boundaries for Social-Ecological Systems Science. Palgrave Macmillan : Cham.

Kennedy, H., J.W. Fourqurean, and S. Papadimitriou. 2018. The Calcium Carbonate Cycle in Seagrass Ecosystems, in Windham-Myers, L., S. Crooks and T. Troxler (eds.) The State of Coastal Wetland Carbon Science, Practice and Policy. CRC Press : Boca Raton, Florida.

Kristensen, E., R.M. Connolly, X.L. Otero, C. Marchand, T.O. Ferreira, and V.H. Rivera-Monroy. 2017. Biogeochemical Cycles: Global Approaches and Perspectives , pp. 163-209 in Rivera-Monroy, V.H., S.Y. Lee, E. Kristensen and R.R. Twilley (eds.) Mangrove Ecosystems: A Global Biogeographic Perspective Structure, Function and Services. Springer International Publishing : Cham, Switzerland.

Rivera-Monroy, V.H., M.J. Osland, J.W. Day, S. Ray, A. Rovai, R. Day, and J. Mukherjee. 2017. Advancing Mangrove Macroecology, pp. 347-381 in Rivera-Monroy, V.H., S.Y. Lee, E. Kristensen and R.R. Twilley (eds.) Mangrove Ecosystems: A Global Biogeographic Perspective Structure, Function and Services. Springer International Publishing : Cham, Switzerland.

Rivera-Monroy, V.H., S.Y. Lee, S.Y. Lee, and R.R. Twilley. 2017. Introduction, pp. 1-16 in Rivera-Monroy, V.H., S.Y. Lee, E. Kristensen and R.R. Twilley (eds.) Mangrove Ecosystems: A Global Biogeographic Perspective Structure, Function and Services. Springer International Publishing : Cham, Switzerland.

Roy Chowdhury, R., E. Uchida, L. Chen, V. Osorio, and L. Yoder. 2017. Anthropogenic Drivers of Mangrove Loss: Geographic Patterns and Implications for Livelihoods , pp. 275-300 in Rivera-Monroy, V.H., S.Y. Lee, E. Kristensen and R.R. Twilley (eds.) Mangrove Ecosystems: A Global Biogeographic Perspective Structure, Function and Services. Springer International Publishing : Cham, Switzerland.

Twilley, R.R., E. Castañeda-Moya, V.H. Rivera-Monroy, and A. Rovai. 2017. Productivity and Carbon Dynamics in Mangrove Wetlands, pp. 113-162 in Rivera-Monroy, V.H., S.Y. Lee, E. Kristensen and R.R. Twilley (eds.) Mangrove Ecosystems: A Global Biogeographic Perspective Structure, Function and Services. Springer International Publishing : Cham, Switzerland.

Vanderbilt, K., and D. Blankman. 2017. Reliable Metadata and the Creation of Trustworthy, Reproducible, and Re-usable Data Sets, pp. 179-194 in Shavit, A. and A. Ellison (eds.) Stepping in the Same River Twice: Replication in Biological Research. Yale University Press : New Haven, Connecticut.

Wheeler, J., M. Servilla, and K. Vanderbilt. 2017. Beyond Discovery: Cross-Platform Application of Ecological Metadata Language in Support of Quality Assurance and Control (A case study), pp. 184-187 in Johnston, L.R. (eds.) Curating Research Data, Volume 2: A Handbook of Current Practice. Association of College and Research Libraries : Chicago, Illinois.

Cattelino, J.. 2016. Loving the native: Invasive species and the cultural politics of flourishing, pp. 129-137 in Heise, U., J. Christensen and M. Niemann (eds.) The Routledge Companion to the Environmental Humanities. Routledge : London.

Gaiser, E.E.. 2016. The Benefits of Long-Term Environmental Research, Friendships, and Boiled Peanuts, pp. 177-184 in Willig, M.R. and L.R. Walker (eds.) Long-Term Ecological Research: Changing the Nature of Scientists. Oxford University Press.

Rehage, J.S., J. Cote, and A. Sih. 2016. The role of dispersal behaviour and personality in post-establishment spread, pp. 96-118 in Weis, J.S. and D. Sol (eds.) Biological Invasions and Animal Behaviour. Cambridge University Press.

Trexler, J.C., and W.F. Loftus. 2016. Invertebrates of the Florida Everglades, pp. 321-356 in Batzer, D. and D. Boix (eds.) Invertebrates in Freshwater Wetlands. Springer International Publishing.

Troxler, T.. 2016. Collaboration and Broadening Our Scope: Relevance of LTER Science to the Global Community, pp. 185-195 in Willig, M.R. and L.R. Walker (eds.) Long-Term Ecological Research: Changing the Nature of Scientists. Oxford University Press.

Boucek, R., and J.S. Rehage. 2015. Effects of an episodic drought on a floodplain subsidy consumed by mangrove river fishes, in Murchie, K.J. and P.P. Daneshgar (eds.) Mangroves as Fish Habitat. Proceedings of the 2nd Mangroves as Fish Habitat meeting.. American Fisheries Society.

Chambers, L.G., S.E. Davis, and T. Troxler. 2015. Sea Level Rise in the Everglades: Plant-Soil-Microbial Feedbacks in Response to Changing Physical Conditions, pp. 89-114 in Entry, J., K. Jayachandran, A.D. Gottlieb and A. Ogram (eds.) Microbiology of the Everglades Ecosystem. CRC Press : Boca Raton, FL.

Frankovich, T.A., and A. Wachnicka. 2015. Epiphytic diatoms along phosphorus and salinity gradients in Florida Bay (Florida, U.S.A.), an illustrated guide and annotated checklist, pp. 231-286 in Entry, J., K. Jayachandran, A.D. Gottlieb and A. Ogram (eds.) Microbiology of the Everglades Ecosystem. CRC Press : Boca Raton, Florida.

Gaiser, E.E., A.D. Gottlieb, S.S. Lee, and J.C. Trexler. 2015. The Importance of Species-Based Microbial Assessment of Water Quality in Freshwater Everglades Wetlands, pp. 115-130 in Entry, J., K. Jayachandran, A.D. Gottlieb and A. Ogram (eds.) Microbiology of the Everglades Ecosystem. CRC Press : Boca Raton, Florida.

Gann, D., J.H. Richards, S.S. Lee, and E.E. Gaiser. 2015. Detecting Calcareous Periphyton Mats in the Greater Everglades Using Passive Remote Sensing Methods, pp. 350-374 in Entry, J., K. Jayachandran, A.D. Gottlieb and A. Ogram (eds.) Microbiology of the Everglades Ecosystem. CRC Press : Boca Raton, Florida.

Gottlieb, A.D., E.E. Gaiser, and S.E. Hagerthey. 2015. Changes in Hydrology, Nutrient Loading and Conductivity in the Florida Everglades, and Concurrent Effects on Periphyton Community Structure and Function, pp. 131-154 in Entry, J., K. Jayachandran, A.D. Gottlieb and A. Ogram (eds.) Microbiology of the Everglades Ecosystem. CRC Press : Boca Raton, Florida.

Ogden, L.A., N. Heynen, U. Oslender, P. West, K. Kassam, and P. Robbins. 2015. The Politics of Earth Stewardship in the Uneven Anthropocene, pp. 137-157 in Rozzi, R., F.S. Chapin, J.B. Callicott, S.T.A. Pickett, M.E. Power, J.J. Armesto and R.H. May Jr. (eds.) Earth Stewardship: Linking Ecology and Ethics in Theory and Practice. Springer.

Rehage, J.S., R. Boucek, and J. Lee. 2015. Mangrove Habitat Use by Resident versus Migrant Sport Fishes in the Coastal Everglades, in Murchie, K.J. and P.P. Daneshgar (eds.) Mangroves as Fish Habitat. Proceedings of the 2nd Mangroves as Fish Habitat meeting.. American Fisheries Society.

Trexler, J.C., E.E. Gaiser, J. Kominoski, and J.L. Sanchez. 2015. The Role of Periphyton Mats in Consumer Community Structure and Function in Calcareous Wetlands: Lessons from the Everglades, pp. 155-179 in Entry, J., K. Jayachandran, A.D. Gottlieb and A. Ogram (eds.) Microbiology of the Everglades Ecosystem. CRC Press : Boca Raton, Florida.

Wdowinski, S., and S.-H. Hong. 2015. Wetland InSAR: A review of the technique and applications, pp. 137-154 in Tiner, R.W., M.W. Lang and V.V. Klemas (eds.) Remote Sensing of Wetlands. CRC Press.

Jaffe, R., K.M. Cawley, and Y. Yamashita. 2014. Applications of Excitation Emission Matrix Fluorescence with Parallel Factor Analysis (EEM-PARAFAC) in Assessing Environmental Dynamics of Natural Dissolved Organic Matter (DOM) in Aquatic Environments: A Review, pp. 27-73 in Rosario-Ortiz, F. (eds.) Advances in the Physicochemical Characterization of Dissolved Organic Matter: Impact on Natural and Engineered Systems. American Chemical Society : Washington, DC.

Madden, C.J.. 2013. Use of models in Ecosystem-based management of the Southern Everglades and Florida Bay, Florida, pp. 25-51 in Day, J.W. and A. Yanez-Arancibia (eds.) Ecosystem-Based Management of the Gulf of Mexico. Texas A&M University Press : College Station, TX.

Rivera-Monroy, V.H., E. Castañeda-Moya, J.G. Barr, V. Engel, J.D. Fuentes, T. Troxler, R.R. Twilley, S. Bouillon, T.J. Smith, and T.L. O'Halloran. 2013. Current Methods to Evaluate Net Primary Production and Carbon Budgets in Mangrove Forests, pp. 243-288 in Delaune, R.D., K.R. Reddy, P. Megonigal and C. Richardson (eds.) Methods in Biogeochemistry of Wetlands. Soil Science Society of America Book Series.

Boyer, J.N., and H.O. Briceno. 2012. Water residence time is a significant driver of ecosystem structure and function in estuaries, pp. 119 in Kruczynski, W.L. and P.J. Fletcher (eds.) Tropical Connections: South Florida's Marine Environment. IAN Press, University of Maryland Center for Environmental Science : Cambridge, MD.

Gaiser, E.E., J.C. Trexler, and P. Wetzel. 2012. The Florida Everglades, pp. 231-252 in Batzer, D. and A. Baldwin (eds.) Wetland Habitats of North America: Ecology and Conservation Concerns. University of California Press : Berkeley.

Heithaus, M.R., and J.J. Vaudo. 2012. Predator-Prey Interactions, pp. 505-546 in Carrier, J.C., J. Musick and M.R. Heithaus (eds.) Biology of Sharks and Their Relatives, Second Edition. CRC Press : Boca Raton, FL.

Rudnick, D.T., S.P. Kelly, C.J. Madden, K.M. Cunniff, J.N. Boyer, and S. Blair. 2012. An unprecedented phytoplankton bloom occurred in eastern Florida Bay from 2005-2008, pp. 126-128 in Kruczynski, W.L. and P.J. Fletcher (eds.) Tropical Connections: South Florida's Marine Environment. IAN Press, University of Maryland Center for Environmental Science : Cambridge, MD.

Jopp, F., D.L. DeAngelis, and J.C. Trexler. 2011. Chapter 18. Trophic Cascades and Food Web Stability in Fish Communities of the Everglades, pp. 257-268 in Jopp, F., H. Reuter and B. Breckling (eds.) Modelling Complex Ecological Dynamics- An Introduction into Ecological Modeling for Students, Teachers & Scientists. Springer-Verlag : Berlin, Heidelberg.

Rivera-Monroy, V.H., R.D. Delaune, A.B. Owens, J. Visser, J.R. White, R.R. Twilley, H. Hernandez-Trejo, and J.A. Benitez. 2011. Removal of Physical Materials from Systems: Loss of Space, Area, and Habitats, pp. 185-215 in Wolanski, E. and D.S. McLusky (eds.) Treatise on Estuarine and Coastal Science, Volume 8. Waltham: Academic Press.

Trexler, J.C., D.L. DeAngelis, and J. Jiang. 2011. Community assembly and mode of reproduction: predicting the distribution of livebearing fishes, in Evans, J., A. Pilastro and I. Schlupp (eds.) Ecology and Evolution of Poeciliid Fishes. University of Chicago Press : Chicago, IL.

Brondizio, E., and R. Roy Chowdhury. 2010. Spatio-temporal methodologies in Environmental Anthropology: Geographic Information Systems, remote sensing, landscape changes and local knowledge, pp. 266-298 in Vaccaro, I., E.A. Smith and S. Aswani (eds.) Society and Environment: Methods and Research Design. Cambridge University Press.

Cooper, S., E.E. Gaiser, and A. Wachnicka. 2010. Estuarine paleoecological reconstructions using diatoms, pp. 324-345 in Smol, J.P. and E.F. Stoermer (eds.) The Diatoms: Applications in Environmental and Earth Sciences. Cambridge University Press : New York.

DeAngelis, D.L., J.C. Trexler, and D.D. Donalson. 2010. Competition dynamics in a seasonally varying wetland, pp. 1-14 in Cantrell, S., C. Cosner and S. Ruan (eds.) Spatial Ecology. Chapman Hall/CRC Press : Boca Raton, FL.

Gaiser, E.E., and K. Ruhland. 2010. Diatoms as Indicators of Environmental Change in Wetlands and Peatlands, pp. 473-496 in Smol, J.P. and E.F. Stoermer (eds.) The Diatoms: Applications in Environmental and Earth Sciences. Cambridge University Press : Cambridge.

Glibert, P.M., J.N. Boyer, C. Heil, C.J. Madden, B. Sturgis, and C.S. Wazniak. 2010. Blooms in lagoons: Different from those of river-dominated estuaries, pp. 98-113 in Kennish, M.J. and H.W. Paerl (eds.) Coastal Lagoons: Critical Habitats of Environmental Change. CRC Press : Boca Raton, FL.

Heithaus, M.R., A. Frid, J.J. Vaudo, B. Worm, and A.J. Wirsing. 2010. Unraveling the ecological importance of elasmobranchs, pp. 611-637 in Heithaus, M.R., J.C. Carrier and J. Musick (eds.) The biology of sharks and their relatives II: Biodiversity, adaptive physiology, and conservation. CRC Press : Boca Raton, FL.

Trexler, J.C., and D.L. DeAngelis. 2010. Modeling the evolution of complex reproductive adaptations in poeciliid fishes: Matrotrophy and superfetation, pp. 231-240 in Uribe, M.C. and H.J. Greer (eds.) Viviparous Fishes II. New Life Publications : Homestead, FL.

Davis, S.E., D. Lirman, and J. Wozniak. 2009. Nitrogen and phosphorus exchange among tropical coastal ecosystems, pp. 9-44 in Nagelkerken, Ivan (eds.) Ecological Connectivity Among Tropical Coastal Ecosystems. Springer : New York.

Dittmar, T., B. Koch, and R. Jaffe. 2009. Tools for studying biogeochemical connectivity among tropical coastal ecosystems, pp. 425-455 in Nagelkerken, Ivan (eds.) Ecological Connectivity among Tropical Coastal Ecosystems. Springer : New York.

Twilley, R.R., and V.H. Rivera-Monroy. 2009. Ecogeomorphic Models of Nutrient Biogeochemistry for Mangrove Wetlands, pp. 641-675 in Perillo, G.M.E., E. Wolanski, D.R. Cahoon and M.M. Brinson (eds.) Coastal Wetlands: An Integrated Ecosystem Approach. Elsevier : New York, NY.

Hall, R.O., S.E. Thomas, and E.E. Gaiser. 2007. Measuring primary production in freshwater ecosystems, pp. 175-203 in Fahey, T.J. and A.K. Knapp (eds.) Principles and Standards for Measuring Net Primary Production in Long-Term Ecological Studies. Oxford University Press.

Knapp, A.K., J.M. Briggs, and D.L. Childers. 2007. Estimating aboveground net primary production in grassland and herbaceous dominated systems, pp. 27- 48 in Fahey, T.J. and A.K. Knapp (eds.) Principles and Standards for Measuring Net Primary Production in Long-term Ecological Studies. Oxford University Press.

Price, R.M., and P.K. Swart. 2006. Geochemical indicators of groundwater recharge in the surficial aquifer system: Everglades National Park, Florida, USA, pp. 251-266 in Harmon, R.S. and D. Wicks (eds.) Perspectives on karst geomorphology, hydrology, and geochemistry -A Tribute volume to Derek C. Ford and William B. White: GSA Special Paper 404. Geological Society of America.

Trexler, J.C., and D.E. Busch. 2003. Monitoring, assessment, and ecoregional initiatives: a synthesis, pp. 405-424 in Busch, D.E. and J.C. Trexler (eds.) Monitoring Ecosystems: Interdisciplinary Approaches for Evaluating Ecoregional Initiatives. Island Press : Washington, D.C..

Trexler, J.C., W.F. Loftus, and J. Chick. 2003. Setting and monitoring restoration goals in the absence of historical data: The case of fishes in the Florida Everglades, pp. 351-376 in Busch, D.E. and J.C. Trexler (eds.) Monitoring Ecosystems: Interdisciplinary Approaches for Evaluating Ecoregional Initiatives. Island Press : Washington, D.C..

Journal Articles (770)

Anderson, K.J., J. Kominoski, and J.P. Sah. 2024. Intrinsic and extrinsic drivers of organic matter processing along phosphorus and salinity gradients in coastal wetlands. Journal of Ecology DOI: 10.1111/1365-2745.14302.

Anderson, K.J., J. Kominoski, C.J. Choi, and U. Stingl. 2024. Functional effects of subsidies and stressors on benthic microbial communities along freshwater to marine gradients. Ecology : e4427.

Anderson, K.J., J. Kominoski, C. Osburn, and M.A. Smith. 2024. Shifting sources and fates of carbon with increasing hydrologic presses and pulses in coastal wetlands. Journal of Geophysical Research: Biogeosciences 129: e2023JG007903.

Boucek, R., K.A. Anderson, B.L.H. Jones, and J.S. Rehage. 2024. When fishers ask for more protection: Co-produced spatial management recommendations to protect seagrass meadows from leisure boating. Marine Policy 167: 106227.

Castillo, N., R.O. Santos, W.R. James, R. Rezek, D. Cerveny, R. Boucek, A.J. Adams, J. Fick, T. Brodin, and J.S. Rehage. 2024. Widespread pharmaceutical exposure at concentrations of concern for a subtropical coastal fishery: Bonefish (Albula vulpes). Marine Pollution Bulletin 209, Part A: 117143.

Castillo, N., R.O. Santos, W.R. James, R. Rezek, D. Cerveny, R. Boucek, A.J. Adams, J. Fick, T. Brodin, and J.S. Rehage. 2024. Differential tissue distribution of pharmaceuticals in a wild subtropical marine fish. Aquatic Toxicology 275: 107064.

Castillo, N., W.R. James, R.O. Santos, R. Rezek, D. Cerveny, R. Boucek, A.J. Adams, S. Trabelsi, A. Distrubell, M. Sandquist, J. Fick, T. Brodin, and J.S. Rehage. 2024. Identifying pathways of pharmaceutical exposure in a mesoconsumer marine fish. Journal of Hazardous Materials 477: 135382.

Castillo, N., W.R. James, R.O. Santos, R. Rezek, D. Cerveny, R. Boucek, A.J. Adams, T. Goldberg, L. Campbell, A. Perez, J. Schmitter-Soto, J. Lewis, J. Fick, T. Brodin, and J.S. Rehage. 2024. Understanding pharmaceutical exposure and the potential for effects in marine biota: A survey of bonefish (Albula vulpes) across the Caribbean Basin. Chemosphere 349: 140949.

Flood, P.J., W.F. Loftus, and J.C. Trexler. 2024. Do community changes persist after irruptive population dynamics? A case study from an invasive species boom and bust. Oecologia DOI: 10.1007/s00442-024-05582-3.

Gatto, J., J. Kline, and J.C. Trexler. 2024. A case study of sequential colonization: intra- and interspecific patterns of recovery in a hydrologically pulsed ecosystem. Environmental Biology of Fishes 107: 347-367.

James, W.R., B. Furman, J. Rodemann, S.V. Costa, Z.F. Fratto, J. Nelson, J.S. Rehage, and R.O. Santos. 2024. Widespread habitat loss leads to ecosystem-scale decrease in trophic function. Global Change Biology 30: e17263.

Jones, B.L.H., R.O. Santos, W.R. James, S.V. Costa, A.J. Adams, R. Boucek, L. Coals, L.C. Cullen-Unsworth, S. Shephard, and J.S. Rehage. 2024. New directions for Indigenous and local knowledge research and application in fisheries science: Lessons from a systematic review. Fish and Fisheries DOI: 10.1111/faf.12831.

Julian, P., J.W. Fourqurean, S.E. Davis, D.D. Surratt, E.E. Gaiser, J. Kominoski, T. Troxler, J.N. Boyer, S.E. Thomas, H.O. Briceno, C.J. Madden, E. Montes, and C.R. Kelble. 2024. Long-term patterns and trends in water column biogeochemistry in a changing environment. Estuarine, Coastal and Shelf Science 306: 108896.

Kahmann, G., J.S. Rehage, J. Massie, J. Nelson, R.O. Santos, N. Viadero, W.R. James, R. Boucek, D. Crane, and R. Rezek. 2024. Trophic niche of a nonnative invader and environmental drivers of its increasing populations in the coastal Everglades. Biological Invasions DOI: 10.1007/s10530-024-03444-w.

Lamb-Wotton, L., T. Troxler, C. Coronado-Molina, S.E. Davis, D. Gann, K. Ishtiaq, S.L. Malone, P.C. Olivas, D.T. Rudnick, and F.H. Sklar. 2024. Evaluating hydrogeomorphic condition across ecosystem states in a non-tidal, brackish peat marsh of the Florida Coastal Everglades, USA. Estuaries and Coasts DOI: 10.1007/s12237-024-01364-5.

Nocentini, A., J. Redwine, E.E. Gaiser, T. Hill, S. Hoffman, J. Kominoski, J.P. Sah, D. Shinde, and D.D. Surratt. 2024. Rehydration of degraded wetlands: Understanding drivers of vegetation community trajectories. Ecosphere 15: e4813.

Oliveira, P.R.B., D. Leyva, L.V. Tose, C. Weisbrod, A.N. Kozhinov, K.O. Nagornov, Y.O. Tsybin, and F.A. Fernandez-Lima. 2024. Revisiting dissolved organic matter analysis using high-resolution trapped ion mobility and FT-ICR mass spectrometry. Journal of the American Society for Mass Spectrometry 35: 2400-2407.

Palomino-Angel, S., S. Wdowinski, and S. Li. 2024. Wetlands water level measurements from the new generation of satellite laser altimeters: Systematic spatial-temporal evaluation of ICESat-2 and GEDI missions over the South Florida Everglades. Water Resources Research 60: e2023WR035422.

Ross, M.S., S. Stoffella, P.L. Ruiz, S.C. Subedi, J.F. Meeder, J.P. Sah, R. Vidales, P.R. Minchin, L.J. Scinto, and K. Zhang. 2024. Transient vegetation dynamics in a tropical coastal wetland: Sea-level rise, glycophyte retreat, and incipient loss in plant diversity. Journal of Vegetation Science 35: e13267.

Sloey, T.M., S.P. Charles, L. Xiong, E. Castañeda-Moya, E.S. Yando, and D. Lagomasino. 2024. Challenges to and importance of considering early and intermediate ontogenetic stages in mangrove forest recovery and restoration. Marine Pollution Bulletin 209, Part B: 117287.

Yannick, D., S. Oberbauer, C.L. Staudhammer, J.A. Cherry, and G. Starr. 2024. Carbon dynamics of a coastal wetland transitioning to mangrove forest. Journal of Geophysical Research: Biogeosciences 129: e2023JG007991.

Zeller, M., B. Van Dam, C. Lopes, A.M. McKenna, C. Osburn, J.W. Fourqurean, J. Kominoski, and M.E. Bottcher. 2024. The unique biogeochemical role of carbonate-associated organic matter in a subtropical seagrass meadow. Communications Earth & Environment 5: 681.

Zhang, B., D. Gann, S. Wdowinski, C. Lin, E. Hestir, L. Lamb-Wotton, K. Ishtiaq, K. Smith, and Y. Li. 2024. Space-based mapping of pre- and post-hurricane mangrove canopy heights using machine learning with multi-sensor observations. Remote Sensing 16: 3992.

Anderson, K.J., J. Kominoski, A. Nocentini, and S. Hoffman. 2023. Dissolved organic matter in peat and marl marshes vary with nutrient enrichment and restored hydrology. Restoration Ecology DOI: 10.1111/rec.13905.

Anjuman, A., Y. Xiang, G. Liu, and Y. Cai. 2023. Compositional and spectroscopic analysis of dissolved organic matter samples from Everglades periphyton and water. Environmental Science and Pollution Research DOI: 10.1007/s11356-023-29461-1.

Bruhn, A.D., U. Wunsch, C. Osburn, J.C. Rudolph, and C.A. Stedmon. 2023. Lignin phenol quantification from machine learning-assisted decomposition of liquid chromatography-absorbance spectroscopy data. Limnology and Oceanography: Methods 21: 508-528.

Calhoun-Grosch, S., E.M. Foster, W.R. James, R.O. Santos, J.S. Rehage, and J. Nelson. 2023. Trophic niche metrics reveal long-term shift in Florida Bay food webs. Ecosystems 26: 1183-1194.

Chavez, S., S. Wdowinski, D. Lagomasino, E. Castañeda-Moya, T.E. Fatoyinbo, R.P. Moyer, and J.M. Smoak. 2023. Estimating structural damage to mangrove forests using airborne Lidar imagery: Case study of damage induced by the 2017 Hurricane Irma to mangroves in the Florida Everglades, USA. Sensors 23: 6669.

Congdon, V.M., M.O. Hall, B. Furman, J.E. Campbell, M.J. Durako, K.L. Goodin, and K.H. Dunton. 2023. Common ecological indicators identify changes in seagrass condition following disturbances in the Gulf of Mexico. Ecological Indicators 156: 111090.

Flood, P.J., W.F. Loftus, and J.C. Trexler. 2023. Fishes in a seasonally pulsed wetland show spatiotemporal shifts in diet and trophic niche but not shifts in trophic position. Food Webs 34: e00265.

Fourqurean, J.W. et al. 2023. Seagrass abundance predicts surficial soil organic carbon stocks across the range of Thalassia testudinum in the Western North Atlantic. Estuaries and Coasts 46: 1280-1301.

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Gervasi, C.L., M. Karnauskas, A. Rios, R.O. Santos, W.R. James, R. Rezek, and J.S. Rehage. 2023. Rapid approach for assessing an unregulated fishery using a series of data-limited tools. Marine and Coastal Fisheries: Dynamics, Management, and Ecosystem Science, 15: e10270.

James, W.R., V. Bautista, R. Rezek, J.S. Rehage, and R.O. Santos. 2023. A review of the potential impacts of commercial inshore pink shrimp fisheries on the recreational flats fishery in Biscayne Bay, FL, USA. Environmental Biology of Fishes 106: 349-360.

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Krause, J.R., C. Lopes, S.S. Wilson, J.N. Boyer, H.O. Briceno, and J.W. Fourqurean. 2023. Status and trajectories of soft-bottom benthic communities of the South Florida seascape revealed by 25 years of seagrass and water quality monitoring. Estuaries and Coasts 46: 477-493.

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Pintar, M.R., N.J. Dorn, J. Kline, and J.C. Trexler. 2023. Contrasting invasion histories and effects of three non-native fishes observed with long-term monitoring data. Biological Invasions 25: 3887-3903.

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Rezek, R., W.R. James, V. Bautista, I. Zink, J.S. Rehage, and R.O. Santos. 2023. Temporal trends of Biscayne Bay pink shrimp fisheries catch, economic indicators, and potential interactions with South Florida recreational flats fisheries. Environmental Biology of Fishes 106: 361-379.

Rodemann, J., W.R. James, J.S. Rehage, H. Baktoft, S.V. Costa, R.D. Ellis, L. Gonzalez, and R.O. Santos. 2023. Residency and fine-scale habitat use of juvenile goliath grouper (Epinephelus itajara) in a mangrove nursery. Bulletin of Marine Science 99: 111-118.

Strickland, B.A., P.J. Flood, J. Kline, F.J. Mazzotti, M.R. Heithaus, and J.C. Trexler. 2023. An apex predator engineers wetland food-web heterogeneity through nutrient enrichment and habitat modification. Journal of Animal Ecology 92: 1388-1403.

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Zhao, J., S. Chakrabarti, R.M. Chambers, P. Weisenhorn, R. Travieso, S. Stumpf, E. Standen, H.O. Briceno, T. Troxler, E.E. Gaiser, B. Dhillon, J. Kominoski, and W. Martens-Habbena. 2023. Year-around survey and manipulation experiments reveal differential sensitivities of soil prokaryotic and fungal communities to saltwater intrusion in Florida Everglades wetlands. Science of The Total Environment 858: 159865.

Cherubin, L.M., and R. Burgman. 2022. Effects of climate change and water management on West Florida Shelfʼs dynamics. Bulletin of Marine Science 98: 393-418.

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Gaiser, E.E., J. Kominoski, D. McKnight, C.A. Bahlai, C. Cheng, S. Record, W.M. Wollheim, K.R. Christianson, M.R. Downs, P.A. Hawman, S.J. Holbrook, A. Kumar, D.R. Mishra, N.P. Molotch, R.B. Primack, A. Rassweiler, R.J. Schmitt, and L.A. Sutter. 2022. Long-term ecological research and the COVID-19 anthropause: A window to understanding social–ecological disturbance. Ecosphere 13: e4019.

Gervasi, C.L., J. Massie, J. Rodemann, S. Trabelsi, R.O. Santos, and J.S. Rehage. 2022. Recreational angler contributions to fisheries management are varied and valuable: Case studies from South Florida. Fisheries 47: 469-477.

Gervasi, C.L., J. Nelson, P.K. Swart, R.O. Santos, R. Rezek, W.R. James, A.E. Jefferson, J.M. Drymon, J. Carroll, R. Boucek, and J.S. Rehage. 2022. Otolith stable isotope micro-sampling to discriminate poorly studied stocks: Crevalle Jack in the eastern gulf of Mexico. Estuarine, Coastal and Shelf Science 278: 108130.

Gervasi, C.L., R.O. Santos, R. Rezek, W.R. James, R. Boucek, C. Bradshaw, C. Kavanagh, J.K. Osborne, and J.S. Rehage. 2022. Bottom-up conservation: using translational ecology to inform conservation priorities for a recreational fishery. Canadian Journal of Fisheries and Aquatic Sciences 79: 47-62.

Grove, K., and L. Rickards. 2022. Contextualizing narratives of Geography’s past, present, and future: Synthesis, difference, and cybernetic control. Environment and Planning F 1: 26-40.

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He, D., S.N. Ladd, J. Park, J.P. Sachs, B.R.T. Simoneit, J.M. Smoak, and R. Jaffe. 2022. Carbon and hydrogen isotopes of taraxerol in mangrove leaves and sediment cores: implications for paleo-reconstructions. Geochimica et Cosmochimica Acta 324: 262-279.

Hogan, J.A., E. Castañeda-Moya, L. Lamb-Wotton, T. Troxler, and C. Baraloto. 2022. Water levels primarily drive variation in photosynthesis and nutrient use of scrub Red Mangroves in the southeastern Florida Everglades. Tree Physiology 42: 797-814.

Ishtiaq, K., T. Troxler, L. Lamb-Wotton, B.J. Wilson, S.P. Charles, S.E. Davis, J. Kominoski, D.T. Rudnick, and F.H. Sklar. 2022. Modeling net ecosystem carbon balance and loss in coastal wetlands exposed to sea-level rise and saltwater intrusion. Ecological Applications 32: e2702.

James, W.R., R.O. Santos, J. Rodemann, R. Rezek, Z.F. Fratto, B. Furman, M.O. Hall, C.R. Kelble, J.S. Rehage, and J. Nelson. 2022. Widespread seagrass die-off has no legacy effect on basal resource use of seagrass food webs in Florida Bay, USA. ICES Journal of Marine Science 79: 1831-1842.

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Malone, S.L., J. Zhao, J. Kominoski, G. Starr, C.L. Staudhammer, P.C. Olivas, J.A. Cummings, and S. Oberbauer. 2022. Integrating aquatic metabolism and net ecosystem CO2 balance in short- and long-hydroperiod subtropical freshwater wetlands. Ecosystems 25: 567-585.

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Massie, J., R.O. Santos, R. Rezek, W.R. James, N. Viadero, R. Boucek, D.A. Blewett, A.A. Trotter, P.W. Stevens, and J.S. Rehage. 2022. Primed and cued: long-term acoustic telemetry links interannual and seasonal variations in freshwater flows to the spawning migrations of Common Snook in the Florida Everglades. Movement Ecology 10: 48.

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Sullivan, K.L., E.E. Gaiser, and H. Swain. 2022. Dissolved organic carbon as a driver of seasonal and multiyear phytoplankton assembly oscillations in a subtropical monomictic lake. Limnology and Oceanography 67: S416-S429.

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Zhang, B., S. Wdowinski, D. Gann, S.-H. Hong, and J.P. Sah. 2022. Spatiotemporal variations of wetland backscatter: The role of water depth and vegetation characteristics in Sentinel-1 dual-polarization SAR observations. Remote Sensing of Environment 270: 112864.

Zhao, X., V.H. Rivera-Monroy, C. Li, I. Vargas-Lopez, R.V. Rohli, Z. Xue, E. Castañeda-Moya, and C. Coronado-Molina. 2022. Temperature across vegetation canopy-water-soil interfaces is modulated by hydroperiod and extreme weather in coastal wetlands. Frontiers in Marine Science 9: 52901.

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Suarez-Abelenda, M., T. O Ferreira, M. Camps-Arbestain, V.H. Rivera-Monroy, F. Macias, G.N. Nobrega, and X.L. Otero. 2014. The effect of nutrient-rich effluents from shrimp farming on mangrove soil carbon storage and geochemistry under semi-arid climate conditions in northern Brazil . Geoderma 213: 551-559.

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Sullivan, P., R.M. Price, F. Miralles-Wilhelm, M.S. Ross, L.J. Scinto, T.W. Dreschel, F.H. Sklar, and E. Cline. 2014. The role of recharge and evapotranspiration as hydraulic drivers of ion concentrations in shallow groundwater on Everglades tree islands, Florida (USA). Hydrological Processes 28: 293-304.

Sullivan, P., R.M. Price, J. Schedlbauer, A.K. Saha, and E.E. Gaiser. 2014. The influence of hydrologic restoration on groundwater-surface water interactions in a karst wetland, the Everglades (FL, USA). Wetlands 34: 23-35.

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Anderson, W., and E.E. Gaiser. 2013. Paleoenvironmental change in wetlands of the Florida Everglades, southeast USA. Journal of Paleolimnology 49: 1-3.

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Calderon-Aguilera, L.E., V.H. Rivera-Monroy, L. Porter-Bolland, A. Martinez-Yrizar, L. Ladah, M. Martinez-Ramos, J. Alcocer, A.L. Santiago-Perez, H.A. Hernandez-Arana, V.M. Reyes-Gomez, D.R. Perez-Salicrup, V. Diaz-Nunez, J. Sosa-Ramirez, J. Herrera-Silveira, and A. Burquez. 2012. An assessment of natural and human disturbance effects on Mexican ecosystems: current trends and research gaps. Biodiversity and Conservation 21: 589-617.

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Cawley, K.M., Y. Ding, J.W. Fourqurean, and R. Jaffe. 2012. Characterising the sources and fate of dissolved organic matter in Shark Bay, Australia: a preliminary study using optical properties and stable carbon isotopes. Marine and Freshwater Research 63: 1098-1107.

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La Hee, J., and E.E. Gaiser. 2012. Benthic diatom assemblages as indicators of water quality in the Everglades and three tropical karstic wetlands. Journal of the North American Benthological Society 31: 205-221.

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Schedlbauer, J., J. Munyon, S. Oberbauer, E.E. Gaiser, and G. Starr. 2012. Controls on ecosystem carbon dioxide exchange in short- and long-hydroperiod Florida Everglades freshwater marshes. Wetlands 32: 801-812.

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Troxler, T., M. Ikenaga, L.J. Scinto, J.N. Boyer, R. Condit, G. Gann, and D.L. Childers. 2012. Patterns of soil bacteria and canopy community structure related to tropical peatland development. Wetlands 32: 769-782.

Vaudo, J.J., and M.R. Heithaus. 2012. Diel and seasonal variation in the use of a nearshore sandflat by a ray community in a near pristine system. Marine and Freshwater Research 63: 1077-1084.

Watanabe, A., K. Moroi, H. Sato, K. Tsutsuki, N. Maie, L. Melling, and R. Jaffe. 2012. Contributions of humic substances to the dissolved organic carbon pool in wetlands from different climates. Chemosphere 88: 1265-1268.

Wirsing, A.J., and M.R. Heithaus. 2012. Behavioural transition probabilities in dugongs change with habitat and predator presence: implications for sirenian conservation. Marine and Freshwater Research 63: 1069-1076.

Wozniak, J., W.T. Anderson, D.L. Childers, E.E. Gaiser, C.J. Madden, and D.T. Rudnick. 2012. Potential N processing by southern Everglades freshwater marshes: Are Everglades marshes passive conduits for nitrogen? Estuarine, Coastal and Shelf Science 96: 60-68.

Zapata-Rios, X., and R.M. Price. 2012. Estimates of groundwater discharge to a coastal wetland using multiple techniques: Taylor Slough, Everglades National Park, USA . Hydrogeology Journal 20 : 1651-1668.

Zapata-Rios, X., R. Rivero, G.M. Naja, and P. Goovaerts. 2012. Spatial and temporal phosphorus distribution changes in a large wetland ecosystem. Water Resources Research 48: W09512.

Zhang, K., H. Liu, Y. Li, H. Xu, J. Shen, J.R. Rhome, and T.J. Smith. 2012. The role of mangroves in attenuating storm surges. Estuarine, Coastal and Shelf Science 102-103: 11-23.

Armitage, A.R., T.A. Frankovich, and J.W. Fourqurean. 2011. Long-term effects of adding nutrients to an oligotrophic coastal environment. Ecosystems 14: 430-444.

Campbell, J.E., and J.W. Fourqurean. 2011. Novel methodology for in situ carbon dioxide enrichment of benthic ecosystems. Limnology and Oceanography Methods 9: 97-109.

Castañeda-Moya, E., R.R. Twilley, V.H. Rivera-Monroy, B.D. Marx, C. Coronado-Molina, and S.M.L. Ewe. 2011. Patterns of root dynamics in mangrove forests along environmental gradients in the Florida Coastal Everglades, USA. Ecosystems 14: 1178-1195.

Childers, D.L., J. Corman, M. Edwards, and J.J. Elser. 2011. Sustainability challenges of phosphorus and food: Solutions from closing the human phosphorus cycle. BioScience 61: 117-124.

Clement, B., J. Javier, J.P. Sah, and M.S. Ross. 2011. The effects of wildfires on the magnetic properties of soils in the Everglades. Earth Surface Processes and Landforms 36: 460-466.

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Fell, J.W., A. Statzell-Tallman, G. Scorzetti, and M.H. Gutierrez. 2011. Five new species of yeasts from fresh water and marine habitats in the Florida Everglades. Antonie van Leeuwenhoek 99: 533-549.

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Gaiser, E.E.. 2011. Book Review: Lodge, T. 2010. The Everglades Handbook: Understanding the Ecosystem. 3rd Edition. CRC Press. Wetlands 31: 445-446.

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Michot, B., E. Meselhe, V.H. Rivera-Monroy, C. Coronado-Molina, and R.R. Twilley. 2011. A tidal creek water budget: Estimation of groundwater discharge and overland flow using hydrologic modeling in the Southern Everglades. Estuarine, Coastal and Shelf Science 93: 438-448.

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Rivera-Monroy, V.H., R.R. Twilley, J.E. Mancera-Pineda, C.J. Madden, A. Alcantara-Eguren, E.B. Moser, B.F. Jonsson, E. Castañeda-Moya, O. Casas-Monroy, P. Reyes-Forero, and J. Restrepo. 2011. Salinity and chlorophyll a as performance measures to rehabilitate a mangrove-dominated deltaic coastal region: the Ciénaga Grande de Santa Marta-Pajarales Lagoon Complex, Colombia. Estuaries and Coasts 34: 1-19.

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Walsh, V., and R.M. Price. 2010. Determination of vertical and horizontal pathways of injected fresh wastewater into a deep saline aquifer (Florida, USA) using natural chemical tracers. Hydrogeology Journal 18: 1027-1042.

Whitmer, A.C., L.A. Ogden, J. Lawton, P. Sturner, P.M. Groffman, L. Schneider, D. Hart, B.S. Halpern, W. Schlesinger, S. Raciti, N. Bettez, S. Ortega, L. Rustad, S.T.A. Pickett, and M. Killelea. 2010. The engaged university: providing a platform for research that transforms society. Frontiers in Ecology and the Environment 8: 314-321.

Xu, Y., and R. Jaffe. 2010. Occurrence, distribution and origin of C30 cyclobotryococcenes in a subtropical wetland/estuarine ecosystem. Chemosphere 81: 918-924.

Yamashita, Y., L.J. Scinto, N. Maie, and R. Jaffe. 2010. Dissolved organic matter characteristics across a subtropical wetland's landscape: Application of optical properties in the assessment of environmental dynamics. Ecosystems 13: 1006-1019.

Armitage, A.R., and J.W. Fourqurean. 2009. Stable isotopes reveal complex changes in trophic relationships following nutrient addition in a coastal marine ecosystem. Estuaries and Coasts 32: 1152-1164.

Balcarczyk, K.L., J.B. Jones Jr., R. Jaffe, and N. Maie. 2009. Stream dissolved organic matter bioavailability and composition in watersheds underlain with discontinuous permafrost. Biogeochemistry 94: 255-270.

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Boyer, J.N., C.R. Kelble, P.B. Ortner, and D.T. Rudnick. 2009. Phytoplankton bloom status: Chlorophyll a biomass as an indicator of water quality condition in the southern estuaries of Florida, USA . Ecological Indicators 9: S56-S67 .

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Campbell, J.E., and J.W. Fourqurean. 2009. Interspecific variation in the elemental and stable isotopic content of seagrasses in South Florida. Marine Ecology Progress Series 387: 109-123.

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Doren, R.F.. 2009. Editorial. Ecological Indicators 9: S1.

Doren, R.F., J.C. Trexler, A.D. Gottlieb, and M. Harwell. 2009. Ecological indicators for system-wide assessment of the Greater Everglades Ecosystem Restoration Program. Ecological Indicators 9: S2-S16.

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Doren, R.F.,Jennifer H. Richards, and J.C. Volin. 2009. A conceptual ecological model to facilitate understanding the role of invasive species in large-scale ecosystem restoration. Ecological Indicators 9: S150-S160.

Frankovich, T.A., A.R. Armitage, A. Wachnicka, E.E. Gaiser, and J.W. Fourqurean. 2009. Nutrient effects on seagrass epiphyte community structure in Florida Bay. Journal of Phycology 45: 1010-1020.

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Gaiser, E.E., N. Deyrup, R. Bachmann, L. Battoe, and H. Swain. 2009. Multidecadal climate oscillations detected in a transparency record from a subtropical Florida lake. Limnology and Oceanography 54: 2228-2232.

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Harwell, M., and B. Sharfstein. 2009. Submerged aquatic vegetation and bulrush in Lake Okeechobee as indicators of greater Everglades ecosystem restoration. Ecological Indicators 9: S46-S55.

Heithaus, M.R., B. Delius, A.J. Wirsing, and M. Dunphy-Daly. 2009. Physical factors influencing the distribution of a top predator in a subtropical oligotrophic estuary. Limnology and Oceanography 54: 472-482.

Herbert, D.A., and J.W. Fourqurean. 2009. Phosphorus availability and salinity control productivity and demography of the seagrass Thalassia testudinum in Florida Bay. Estuaries and Coasts 32: 188-201.

Lorenz, J.J., B. Langan-Mulrooney, P. Frezza, R.G. Harvey, and F.J. Mazzotti. 2009. Roseate spoonbill reproduction as an indicator for restoration of the Everglades and the Everglades estuaries. Ecological Indicators 9: S96-S107.

Madden, C.J., D.T. Rudnick, A.A. McDonald, K.M. Cunniff, and J.W. Fourqurean. 2009. Ecological indicators for assessing and communicating seagrass status and trends in Florida Bay. Ecological Indicators 9: S68-S82. doi:10.1016/j.ecolind.2009.02.004.

Mancera-Pineda, J.E., R.R. Twilley, and V.H. Rivera-Monroy. 2009. Carbon (d13c) and nitrogen (d15n) isotopic discrimination in mangroves in Florida Coastal Everglades as a function of environmental stress. Contributions in Marine Science 38: 109-129.

Mazzotti, F.J., G.R. Best, L.A. Brandt, M.S. Cherkiss, B.M. Jeffery, and K.G. Rice. 2009. Alligators and crocodiles as indicators for restoration of Everglades ecosystems. Ecological Indicators 9: S137-S149.

Rehage, J.S., K.L. Dunlop, and W.F. Loftus. 2009. Antipredator responses by native Mosquitofish to non-native Cichlids: An examination of the role of prey naivete´. Ethology 115: 1046-1056.

Ross, M.S., J.J. O'Brien, G. Ford, K. Zhang, and A. Morkill. 2009. Disturbance and the rising tide: the challenge of biodiversity management on low-island ecosystems. Frontiers in Ecology and the Environment 7: 471-478.

Ross, M.S., P.L. Ruiz, J.P. Sah, and E. Hanan. 2009. Chilling damage in a changing climate in coastal landscapes of the sub-tropical zone: a case study from south Florida. Global Change Biology 15: 1817-1832.

Simoneit, B.R.T., Y. Xu, R. Neto, J. Cloutier, and R. Jaffe. 2009. Photochemical alteration of 3-oxygenated triterpenoids: Implications for the origin of 3,4-seco-triterpenoids in sediments. Chemosphere 74: 543-550.

Smith, T.J., G. Anderson, K. Balentine, G. Tiling, G.A. Ward, and K. Whelan. 2009. Cumulative impacts of hurricanes on Florida mangrove ecosystems: sediment deposition, storm surges and vegetation. Wetlands 29: 24-34.

Stalker, J.C., R.M. Price, and P.K. Swart. 2009. Determining spatial and temporal inputs of freshwater, including submarine groundwater discharge, to a subtropical estuary using geochemical tracers, Biscayne Bay, South Florida. Estuaries and Coasts 32: 694-708.

Trexler, J.C., and C. Goss. 2009. Aquatic fauna as indicators for Everglades restoration: Applying dynamic targets in assessments. Ecological Indicators 9: S108-S119 .

Volety, A.K., M. Savarese, S.G. Tolley, W.S. Arnold, P. Sime, P. Goodman, R.H. Chamberlain, and P.H. Doering. 2009. Eastern oysters (Crassostrea virginica) as an indicator for restoration of Everglades Ecosystems. Ecological Indicators 9: S120-S136.

Williams, C.J., J.N. Boyer, and F.J. Jochem. 2009. Microbial activity and carbon, nitrogen, and phosphorus content in a subtropical seagrass estuary (Florida Bay): evidence for limited bacterial use of seagrass production. Marine Biology 156: 341-353.

Williams, C.J., R. Jaffe, W.T. Anderson, and F.J. Jochem. 2009. Importance of seagrass as a carbon source for heterotrophic bacteria in a subtropical estuary (Florida Bay). Estuarine, Coastal and Shelf Science 85: 507-514.

Berger, U., V.H. Rivera-Monroy, T.W. Doyle, F. Dahdouh-Guebas, N.C. Duke, M.L. Fontalvo-Herazo, H. Hildenbrandt, N. Koedam, U. Mehlig, C. Piou, and R.R. Twilley. 2008. Advances and limitations of individual-based models to analyze and predict dynamics of mangrove forests: A review. Aquatic Botany 89: 260-274.

Bouillon, S., A.V. Borges, E. Castañeda, K. Diele, T. Dittmar, N.C. Duke, E. Kristensen, S.Y. Lee, C. Marchand, J.J. Middelburg, V.H. Rivera-Monroy, R.R. Twilley, and T.J. Smith. 2008. Mangrove production and carbon sinks: A revision of global budget estimates. Global Biogeochemical Cycles 22: GB2013.

Brody, S.D., S.E. Davis, W.E. Highfield, and S.P. Bernhardt. 2008. A spatial-temporal analysis of Section 404 wetland permitting in Texas and Florida: Thirteen years of impact along the Coast. Wetlands 28: 107-116.

DiFrenna, V.J., R.M. Price, and M.R. Savabi. 2008. Identification of a hydrodynamic threshold in karst rocks from the Biscayne Aquifer, south Florida, USA. Hydrogeology Journal 16: 31-42.

Gaiser, E.E., R.F. Doren, P. McCormick, S. Newman, J.H. Richards, and J.C. Trexler. 2008. Comment on "Estimating ecological thresholds for phosphorus in the Everglades". Environmental Science & Technology 42: 6770-6771.

Herbert, D.A., and J.W. Fourqurean. 2008. Ecosystem structure and function still altered two decades after short-term fertilization of a seagrass meadow. Ecosystems 11: 688-700.

Jaffe, R., D. McKnight, N. Maie, R. Cory, W.H. McDowell, and J.L. Campbell. 2008. Spatial and temporal variations in DOM composition in ecosystems: The importance of long-term monitoring of optical properties. Journal of Geophysical Research - Biogeosciences 113: G04032.

Liston, S.E., S. Newman, and J.C. Trexler. 2008. Macroinvertebrate community response to eutrophication in an oligotrophic wetland: An in situ mesocosm experiment. Wetlands 28: 686-694.

Maie, N., O. Pisani, and R. Jaffe. 2008. Mangrove tannins in aquatic ecosystems: their fate and possible role in dissolved organic nitrogen cycling. Limnology & Oceanography 53: 160-171.

Mendez-Alonzo, R., J. Lopez-Portillo, and V.H. Rivera-Monroy. 2008. Latitudinal variation in leaf and tree traits of the mangrove Avicennia germinans (Avicenniaceae) in the Central Region of the Gulf of Mexico. Biotropica 40: 449-456.

Ogden, L.A.. 2008. The Everglades ecosystem and the politics of nature. American Anthropologist 110: 21-32.

Price, R.M., P.K. Swart, and H.E. Willoughby. 2008. Seasonal and spatial variation in the stable isotopic composition (d18O and dD) of precipitation in south Florida. Journal of Hydrology 358: 193-205.

Ruiz-Halpern, S., S.A. Macko, and J.W. Fourqurean. 2008. The effects of manipulation of sedimentary iron and organic matter on sediment biogeochemistry and seagrasses in a subtropical carbonate environment. Biogeochemistry 87: 113-126.

Statzell-Tallman, A., C. Belloch, and J.W. Fell. 2008. Kwoniella mangroviensis gen. nov., sp. nov. (Tremellales, Basidiomycota), a teleomorphic yeast from mangrove habitats in the Florida Everglades and Bahamas. FEMS Yeast Research 8: 103-113.

Williams, C.J., J.N. Boyer, and F.J. Jochem. 2008. Indirect hurricane effects on resource availability and microbial communities in a subtropical wetland - estuary transition zone. Estuaries and Coasts 31: 204-214.

Wozniak, J., D.L. Childers, W.T. Anderson, D.T. Rudnick, and C.J. Madden. 2008. An in situ mesocosm method for quantifying nitrogen cycling rates in oligotrophic wetlands using 15N tracer techniques. Wetlands 28: 502-512.

Yamashita, Y., and R. Jaffe. 2008. Characterizing the interactions between trace metals and dissolved organic matter using excitation-emission matrix and parallel factor analysis. Environmental Science & Technology 42: 7374-7379.

Zhang, K., M. Simard, M.S. Ross, V.H. Rivera-Monroy, P. Houle, P.L. Ruiz, R.R. Twilley, and K. Whelan. 2008. Airborne laser scanning quantification of disturbances from hurricanes and lightning strikes to mangrove forests in Everglades National Park, USA. Sensors 8: 2262-2292.

Collado-Vides, L., V.G. Caccia, J.N. Boyer, and J.W. Fourqurean. 2007. Tropical seagrass-associated macroalgae distributions and trends relative to water quality. Estuarine Coastal and Shelf Science 73: 680-694.

Davis, S.E., and D.L. Childers. 2007. Importance of water source in controlling leaf leaching losses in a dwarf red mangrove (Rhizophora mangle L.) wetland. Estuarine, Coastal and Shelf Science 71: 194-201.

Dorn, N.J., and J.C. Trexler. 2007. Crayfish assemblage shifts in a large drought-prone wetland: the roles of hydrology and competition. Freshwater Biology 20: 113-115.

Ewe, S.M.L., and L.d.S.L. Sternberg. 2007. Water uptake patterns of an invasive exotic plant in coastal saline habitats. Journal of Coastal Research 23: 255-264.

Ewe, S.M.L., L.d.S.L. Sternberg, and D.L. Childers. 2007. Seasonal plant water uptake patterns in the saline southeast Everglades ecotone. Oecologia 152: 607-616.

Gao, M., B.R.T. Simoneit, M. Gantar, and R. Jaffe. 2007. Occurrence and distribution of novel botryococcene hydrocarbons in freshwater wetlands of the Florida Everglades. Chemosphere 70: 224-236.

Maie, N., N.M. Scully, O. Pisani, and R. Jaffe. 2007. Composition of a protein-like fluorophore of dissolved organic matter in coastal wetland and estuarine ecosystems. Water Research 41: 563-570.

Noe, G.B., and D.L. Childers. 2007. Phosphorus budgets in Everglades wetland ecosystems: The effects of hydrology and nutrient enrichment. Wetlands Ecology and Management 15: 189-205.

Poret, N., R.R. Twilley, V.H. Rivera-Monroy, and C. Coronado-Molina. 2007. Belowground decomposition of mangrove roots in Florida Coastal Everglades. Estuaries and Coasts 30: 491-496.

Price, R.M., W.K. Nuttle, B.J. Cosby, and P.K. Swart. 2007. Variation and uncertainty in evaporation from a subtropical estuary: Florida Bay. Estuaries and Coasts 30: 497-506.

Rehage, J.S., and W.F. Loftus. 2007. Seasonal fish community variation in headwater mangrove creeks in the southwestern Everglades: an examination of their role as dry-down refuges. Bulletin of Marine Science 80: 625-645.

Rivera-Monroy, V.H., K. de Mutsert, R.R. Twilley, E. Castañeda-Moya, M.M. Romigh, and S.E. Davis. 2007. Patterns of nutrient exchange in a riverine mangrove forest in the Shark River Estuary, Florida, USA. Hidrobiológica 17: 169-178.

Rivera-Monroy, V.H., R.R. Twilley, J.E. Mancera, A. Alcantara-Eguren, E. Castañeda-Moya,Casas O. Monroy, P. Reyes, J. Restrepo, L. Perdomo, E. Campos, G. Cotes, and E. Villoria. 2007. Adventures and misfortunes in Macondo: Rehabilitation of the Cienaga Grande. Ecotropicos 19: 72-93.

Sternberg, L.d.S.L., M.C. Pinzon, P.F. Vendramini, W.T. Anderson, A.H. Jahren, and K. Beuning. 2007. Oxygen isotope ratios of cellulose-derived phenylglucosazone: An improved paleoclimate indicator of environmental water and relative humidity. Geochimica et Cosmochimica Acta 71: 2463-2473.

Troxler, T.. 2007. Patterns of phosphorus, nitrogen and 15N along a peat development gradient in a coastal mire, Panama. Journal of Tropical Ecology 23: 683-691.

Wachnicka, A., and E.E. Gaiser. 2007. Characterization of Amphora and Seminavis from South Florida, U.S.A. Diatom Research 22: 387-455.

Xu, Y., and R. Jaffe. 2007. Lipid biomarkers in suspended particulates from a subtropical estuary: Assessment of seasonal changes in sources and transport of organic matter. Marine Environmental Research 64: 666-678.

Xu, Y., C.W. Holmes, and R. Jaffe. 2007. Paleoenvironmental assessment of recent environmental changes in Florida Bay, USA: A biomarker based study. Estuarine, Coastal and Shelf Science 73: 201-210.

Armentano, T.V., J.P. Sah, M.S. Ross, D.T. Jones, H.C. Cooley, and C.S. Smith. 2006. Rapid responses of vegetation to hydrological changes in Taylor Slough, Everglades National Park, Florida, USA. Hydrobiologia 569: 293-309.

Armitage, A.R., T.A. Frankovich, and J.W. Fourqurean. 2006. Variable responses within epiphytic and benthic microalgal communities to nutrient enrichment. Hydrobiologia 569: 423-435.

Barr, J.G., J.D. Fuentes, T.L. O'Halloran, D. Barr, and J.C. Zieman. 2006. Carbon assimilation by mangrove forests in the Florida Everglades. Amalgam 1: 27-37.

Bazante, J., G. Jacobi, H. Solo-Gabriele, D.R. Reed, S. Mitchell-Bruker, D.L. Childers, L. Leonard, and M.S. Ross. 2006. Hydrologic measurements and implications for tree island formation within Everglades National Park. Journal of Hydrology 329: 606-619.

Boyer, J.N.. 2006. Shifting N and P limitation along a north-south gradient of mangrove estuaries in South Florida. Hydrobiologia 569: 167-177.

Boyer, J.N., S.K. Dailey, P.J. Gibson, M.T. Rogers, and D. Mir-Gonzalez. 2006. The role of dissolved organic matter bioavailability in promoting phytoplankton blooms in Florida Bay. Hydrobiologia 569: 71-85.

Cardona-Olarte, P., R.R. Twilley, K.W. Krauss, and V.H. Rivera-Monroy. 2006. Responses of neotropical mangrove seedlings grown in monoculture and mixed culture under treatments of hydroperiod and salinity. Hydrobiologia 569: 325-341.

Chambers, R.M., and K.A. Pederson. 2006. Variation in soil phosphorus, sulfur, and iron pools among south Florida wetlands. Hydrobiologia 569: 63-70.

Childers, D.L.. 2006. A synthesis of long-term research by the Florida Coastal Everglades LTER program. Hydrobiologia 569: 531-544.

Childers, D.L., D. Iwaniec, D. Rondeau, G.A. Rubio, E. Verdon, and C.J. Madden. 2006. Responses of sawgrass and spikerush to variation in hydrologic drivers and salinity in southern Everglades marshes. Hydrobiologia 569: 273-292.

Childers, D.L., J.N. Boyer, S.E. Davis, C.J. Madden, D.T. Rudnick, and F.H. Sklar. 2006. Relating precipitation and water management to nutrient concentration patterns in the oligotrophic "upside down" estuaries of the Florida Everglades. Limnology and Oceanography 51: 602-616.

Davis, S.E., D.L. Childers, and G.B. Noe. 2006. The contribution of leaching to the rapid release of nutrients and carbon in the early decay of wetland vegetation. Hydrobiologia 569: 87-97.

Dorn, N.J., J.C. Trexler, and E.E. Gaiser. 2006. Exploring the role of large predators in marsh food webs: evidence for a behaviorally-mediated trophic cascade. Hydrobiologia 569: 375-386.

Evans, S.L., W.T. Anderson, and F.J. Jochem. 2006. Spatial variability in Florida Bay particulate organic matter composition: combining flow cytometry with stable isotope analyses. Hydrobiologia 569: 151-165.

Ewe, S.M.L., E.E. Gaiser, D.L. Childers, D. Iwaniec, V.H. Rivera-Monroy, and R.R. Twilley. 2006. Spatial and temporal patterns of aboveground net primary productivity (ANPP) along two freshwater-estuarine transects in the Florida Coastal Everglades . Hydrobiologia 569: 459-474.

Farber, S., R. Costanza, D.L. Childers, J. Erickson, K. Gross, J.M. Grove, C. Hopkinson, J. Kahn, S. Pincetl, A. Troy, P. Warren, and M. Wilson. 2006. Linking ecology and economics for ecosystem management. Bioscience 56: 117-129.

Frankovich, T.A., E.E. Gaiser, J.C. Zieman, and A. Wachnicka. 2006. Spatial and temporal distributions of epiphytic diatoms growing on Thalassia testudinum Banks ex Konig: Relationships to water quality. Hydrobiologia 569: 259-271.

Gaiser, E.E., A. Zafiris, P.L. Ruiz, F. Tobias, and M.S. Ross. 2006. Tracking rates of ecotone migration due to salt-water encroachment using fossil mollusks in coastal South Florida. Hydrobiologia 569: 237-257.

Gaiser, E.E., J.H. Richards, J.C. Trexler, R.D. Jones, and D.L. Childers. 2006. Periphyton responses to eutrophication in the Florida Everglades: Cross-system patterns of structural and compositional change. Limnology and Oceanography 51: 617-630.

Gil, M., A.R. Armitage, and J.W. Fourqurean. 2006. Nutrient impacts on epifaunal density and species composition in a subtropical seagrass bed. Hydrobiologia 569: 437-447.

Gottlieb, A.D., J.H. Richards, and E.E. Gaiser. 2006. Comparative study of periphyton community structure in long and short-hydroperiod Everglades marshes. Hydrobiologia 569: 195-207.

Green, D., J.C. Trexler, J.J. Lorenz, C.C. McIvor, and T.E. Philippi. 2006. Spatial patterns of fish communities along two estuarine gradients in southern Florida . Hydrobiologia 569: 387-399.

Hajje, N., and R. Jaffe. 2006. Molecular characterization of Cladium peat from the Florida Everglades: biomarker associations with humic fractions. Hydrobiologia 569: 99-112.

Iwaniec, D., D.L. Childers, D. Rondeau, C.J. Madden, and C.J. Saunders. 2006. Effects of hydrologic and water quality drivers on periphyton dynamics in the southern Everglades. Hydrobiologia 569: 223-235.

Jaffe, R., A.I. Rushdi, P.M. Medeiros, and B.R.T. Simoneit. 2006. Natural product biomarkers as indicators of sources and transport of sedimentary organic matter in a subtropical river. Chemosphere 64: 1870-1884.

Jones, V., K. Parish, A. Thomson, G.A. Wolff, N. Maie, and R. Jaffe. 2006. Molecular characterization of proteinaceous material in the Florida coastal Everglades. Hydrobiologia 569: 129-133.

Krauss, K.W., R.R. Twilley, T.W. Doyle, and E.S. Gardiner. 2006. Leaf gas exchange characteristics of three neotropical mangrove species in response to varying hydroperiod. Tree Physiology 26: 959-968.

Krauss, K.W., T.W. Doyle, R.R. Twilley, V.H. Rivera-Monroy, and J.K. Sullivan. 2006. Evaluating the relative contributions of hydroperiod and soil fertility on growth of south Florida mangroves. Hydrobiologia 569: 311-324.

Leonard, L., A.L. Croft, D.L. Childers, S. Mitchell-Bruker, H. Solo-Gabriele, and M.S. Ross. 2006. Characteristics of surface-water flows in the ridge and slough landscape of Everglades National Park: implications for particulate transport. Hydrobiologia 569: 5-22.

Liston, S.E.. 2006. Interactions between nutrient availability and hydroperiod shape macroinvertebrate communities in Florida Everglades marshes. Hydrobiologia 569: 343-357.

Lorenz, J.J., and J.E. Serafy. 2006. Subtroprical wetland fish assemblages and changing salinity regimes: Implications for Everglades restoration. Hydrobiologia 569: 401-422.

Maie, N., J.N. Boyer, C. Yang, and R. Jaffe. 2006. Spatial, geomorphological, and seasonal variability of CDOM in estuaries of the Florida Coastal Everglades. Hydrobiologia 569: 135 - 150.

Maie, N., K. Parish, A. Watanabe, H. Knicker, R. Benner, T. Abe, K. Kaiser, and R. Jaffe. 2006. Characterization of dissolved organic nitrogen in an oligotrophic subtropical coastal ecosystem. Geochimica et Cosmochimica Acta 70: 4491-4506.

Maie, N., R. Jaffe, M. Toshikazu, and D.L. Childers. 2006. Quantitative and qualitative aspects of dissolved organic carbon leached from senescent plants in an oligotrophic wetland. Biogeochemistry 78: 285-314.

Neto, R., R.N. Mead, W.J. Louda, and R. Jaffe. 2006. Organic biogeochemistry of detrital flocculent material (floc) in a subtropical, coastal wetland. Biogeochemistry 77: 283-304.

Peterson, B.J., F.J. Jochem, and J.W. Fourqurean. 2006. Potential role of sponge communities controlling phytoplankton blooms in Florida Bay. Marine Ecology Progress Series 328: 93-103.

Price, R.M., P.K. Swart, and J.W. Fourqurean. 2006. Coastal groundwater discharge - an additional source of phosphorus for the oligotrophic wetlands of the Everglades. Hydrobiologia 569: 23-36.

Rehage, J.S., and J.C. Trexler. 2006. Assessing the net effect of anthropogenic disturbance on aquatic communities in wetlands: Community structure relative to distance from canals. Hydrobiologia 569: 359-373.

Romigh, M.M., S.E. Davis, V.H. Rivera-Monroy, and R.R. Twilley. 2006. Flux of organic carbon in a riverine mangrove wetland in the Florida Coastal Everglades. Hydrobiologia 569: 505-516.

Ross, M.S., S. Mitchell-Bruker, J.P. Sah, S. Stothoff, P.L. Ruiz, D.R. Reed, K. Jayachandran, and C.L. Coultas. 2006. Interaction of hydrology and nutrient limitation in the ridge and slough landscape of the southern Everglades. Hydrobiologia 569: 37-59.

Rubio, G.A., and D.L. Childers. 2006. Controls of herbaceous litter decomposition in the estuarine ecotones of the Florida Everglades. Estuaries and Coasts 29: 257-268.

Saunders, C.J., J.P. Megonigal, and J.F. Reynolds. 2006. Comparison of belowground biomass in C3- and C4-dominated mixed communities in a Chesapeake Bay brackish marsh. Plant and Soil 280: 305-322.

Saunders, C.J., M. Gao, J. Lynch, R. Jaffe, and D.L. Childers. 2006. Using soil profiles of seeds and molecular markers as proxies for sawgrass and wet prairie slough vegetation in Shark Slough, Everglades National Park. Hydrobiologia 569: 475-492.

Simard, M., K. Zhang, V.H. Rivera-Monroy, M.S. Ross, P.L. Ruiz, E. Castañeda-Moya, R.R. Twilley, and E. Rodriguez. 2006. Mapping height and biomass of mangrove forests in Everglades National Park with SRTM elevation data. Photogrammetric Engineering and Remote Sensing 72: 299-311.

Sobrado, M.A., and S.M.L. Ewe. 2006. Ecophysiological characteristics of Avicennia germinans and Laguncularia racemosa coexisting in a scrub mangrove forest at the Indian River Lagoon, Florida. Trees - Structure and Function 20: 679-687.

Sternberg, L.S.L., M.C. Pinzon, W.T. Anderson, and A.H. Jahren. 2006. Variation in oxygen isotope fractionation during cellulose synthesis: Molecular and biosynthetic effects. Plant, Cell and Environment 29: 1881-1889.

Thomas, S.E., E.E. Gaiser, and F. Tobias. 2006. Effects of shading on calcareous benthic periphyton in a short-hydroperiod oligotrophic wetland (Everglades, FL, USA). Hydrobiologia 569: 209-221.

Thomas, S.E., E.E. Gaiser, M. Gantar, and L.J. Scinto. 2006. Quantifying the response of calcareous periphyton crusts to rehydration: a microcosm study (Florida Everglades). Aquatic Botany 84: 317-323.

Tobias, F., and E.E. Gaiser. 2006. Taxonomy and distribution of taxa in the genus Gomphonema from the Florida Everglades, U.S.A. Diatom Research 21: 379-405.

Torres, L.G., M.R. Heithaus, and B. Delius. 2006. Influence of teleost abundance on the distribution and abundance of sharks in Florida Bay, USA. Hydrobiologia 569: 449-455.

Trexler, J.C., E.E. Gaiser, and D.L. Childers. 2006. Interaction of hydrology and nutrients in controlling ecosystem function in oligotrophic coastal environments of South Florida. Hydrobiologia 569: 1-2.

Troxler-Gann, T., and D.L. Childers. 2006. Relationships between hydrology and soils describe vegetation patterns in seasonally flooded tree islands of the southern Everglades, Florida. Plant and Soil 279: 271-286.

Ward, G.A., T.J. Smith, K.R.T. Whelan, and T.W. Doyle. 2006. Regional processes in mangrove ecosystems: spatial scaling relationships, biomass, and turnover rates following catastrophic disturbance. Hydrobiologia 569: 517-527.

Williams, A.J., and J.C. Trexler. 2006. A preliminary analysis of the correlation of food-web characteristics with hydrology and nutrient gradients in the southern Everglades. Hydrobiologia 569: 493-504.

Williams, C.J., and F.J. Jochem. 2006. Ectoenzyme kinetics in Florida Bay: Implications for bacterial carbon source and nutrient status. Hydrobiologia 569: 113-127.

Xu, Y., R. Jaffe, A. Wachnicka, and E.E. Gaiser. 2006. Occurrence of C25 highly branched isoprenoids in Florida Bay: Paleoenvironmental indicators of diatom-derived organic matter inputs. Organic Geochemistry 37: 847-859.

Xu, Y., R.N. Mead, and R. Jaffe. 2006. A molecular marker based assessment of sedimentary organic matter sources and distributions in Florida Bay. Hydrobiologia 569: 179-192.

Anderson, W.T., L.S.L. Sternberg, M.C. Pinzon, T. Troxler-Gann, D.L. Childers, and M. Duever. 2005. Carbon isotopic composition of cypress trees from South Florida and changing hydrologic condition. Dendrochronologia 23: 1-10.

Armitage, A.R., T.A. Frankovich, K.L. HeckJr., and J.W. Fourqurean. 2005. Experimental nutrient enrichment causes complex changes in seagrass, microalgae, and macroalgae community structure in Florida Bay. Estuaries 28: 422-434.

Borum, J., O. Pedersen, T. Greve, T.A. Frankovich, J.C. Zieman, J.W. Fourqurean, and C.J. Madden. 2005. The potential role of plant oxygen and sulphide dynamics in die-off events of the tropical seagrass, Thalassia testudinum. Journal of Ecology 93: 148-158.

Collado-Vides, L., L.M. Rutten, and J.W. Fourqurean. 2005. Spatiotemporal variation of the abundance of calcareous green macroalgae in the Florida Keys: A study of synchrony within a macroalgal functional-form group. Journal of Phycology 41: 742-752.

Davis, S.M., D.L. Childers, J. Lorenz, and T.E. Hopkins. 2005. A conceptual model of ecological interactions in the mangrove estuaries of the Florida Everglades. Wetlands 25: 832-842.

DeAngelis, D.L., J.C. Trexler, and W.F. Loftus. 2005. Life history trade-offs and community dynamics of small fishes in a seasonally pulsed wetland. Canadian Journal of Fisheries and Aquatic Sciences 62: 781-790.

Ewe, S.M.L., and L.d.S.L. Sternberg. 2005. Growth and gas exchange patterns of the invasive exotic Schinus terebinthifolius contrasted with native species under controlled saline conditions. Trees 19: 119-128.

Fourqurean, J.W., S.P. Escorcia, W.T. Anderson, and J.C. Zieman. 2005. Spatial and seasonal variability in elemental content, d13C and d15N of Thalassia testudinum from south Florida and its implication for ecosystem studies. Estuaries 28: 447-461.

Frankovich, T.A., and J.C. Zieman. 2005. Periphyton light transmission relationships in Florida Bay and the Florida Keys. Aquatic Botany 83: 14-30.

Gaiser, E.E., J.C. Trexler, J.H. Richards, D.L. Childers, D. Lee, A.L. Edwards, L.J. Scinto, K. Jayachandran, G.B. Noe, and R.D. Jones. 2005. Cascading ecological effects of low-level phosphorus enrichment in the Florida Everglades. Journal of Environmental Quality 34: 717-723.

Jones, V., M.J. Collins, K.E.H. Penkman, R. Jaffe, and G.A. Wolff. 2005. An assessment of the microbial contribution to aquatic dissolved organic nitrogen using amino acid enantiomeric ratios. Organic Geochemistry 36: 1099-1107.

Krauss, K.W., T.W. Doyle, R.R. Twilley, T.J. Smith, K.R.T. Whelan, and J.K. Sullivan. 2005. Woody debris in the mangrove forests of South Florida. Biotropica 37: 9-15.

Liston, S.E., and J.C. Trexler. 2005. Spatiotemporal patterns in community structure of macroinvertebrates inhabiting calcareous periphyton mats. Journal of the North American Benthological Society 24: 832-844.

Maie, N., C. Yang, T. Miyoshi, K. Parish, and R. Jaffe. 2005. Chemical characteristics of dissolved organic matter in an oligotrophic subtropical wetland/estuarine ecosystem. Limnology and Oceanography 50: 23-35.

Mead, R.N., Y. Xu, J. Chong, and R. Jaffe. 2005. Sedimentary organic matter source assessment in a sub-tropical wetland and estuarine environment using the molecular distribution and carbon isotopic composition of n-alkanes. Organic Geochemistry 36: 363-370.

Romero, L.M., J.W. Fourqurean, and T.J. Smith. 2005. Changes in mass and nutrient content of wood during decomposition in a south Florida mangrove forest. Journal of Ecology 93: 618-631.

Trexler, J.C., W.F. Loftus, and S. Perry. 2005. Disturbance frequency and community structure in a twenty-five year intervention study. Oecologia 145: 140-152.

Troxler-Gann, T., D.L. Childers, and D. Rondeau. 2005. Ecosystem structure, nutrient dynamics, and hydrologic relationships in tree islands of the southern Everglades, Florida, USA. Forest Ecology & Management 214: 11-27.

Twilley, R.R., and V.H. Rivera-Monroy. 2005. Developing performance measures of mangrove wetlands using simulation models of hydrology, nutrient biogeochemistry, and community dynamics. Journal of Coastal Research SI 40: 79-95.

Wetzel, P., A.G. van der Valk, S. Newman, D.E. Gawlik, T. Troxler-Gann, C. Coronado-Molina, D.L. Childers, and F.H. Sklar. 2005. Maintaining tree islands in the Florida Everglades: nutrient redistribution is the key. Frontiers in Ecology 3: 370-376.

Chick, J., and J.C. Trexler. 2004. Spatial scale and abundance patterns of large fish communities in freshwater marshes of the Florida Everglades. Wetlands 24: 652-664.

Daoust, R.J., and D.L. Childers. 2004. Ecological effects of low-level phosphorus additions on two plant communities in a neotropical freshwater wetland ecosystem. Oecologia 141: 672-686.

Davis, S.E., J.E. Cable, D.L. Childers, C. Coronado-Molina, J.W. Day, C.D. Hittle, C.J. Madden, D. Rudnick, E. Reyes, and F. Sklar. 2004. Importance of episodic storm events in controlling ecosystem structure and function in a gulf coast estuary. Journal of Coastal Research 20: 1198-1208.

Ferdie, M., and J.W. Fourqurean. 2004. Responses of seagrass communities to fertilization along a gradient of relative availability of nitrogen and phosphorus in a carbonate environment. Limnology and Oceanography 49: 2082-2094.

Fourqurean, J.W., and L.M. Rutten. 2004. The impact of Hurricane Georges on soft-bottom, backreef communities: site- and species-specific effects in south Florida seagrass beds. Bulletin of Marine Science 75: 239-257.

Jaffe, R., J.N. Boyer, X. Lu, N. Maie, C. Yang, N.M. Scully, and S. Mock. 2004. Source characterization of dissolved organic matter in a subtropical mangrove-dominated estuary by fluorescence analysis. Marine Chemistry 84: 195-210.

Jones, V., C.J. Ruddell, G. Wainwright, H.H. Rees, R. Jaffe, and G.A. Wolff. 2004. One-dimensional and two dimensional polyacrylamide gel electrophoresis: a tool for protein characterization in aquatic samples. Marine Chemistry 85: 63-73.

Rivera-Monroy, V.H., R.R. Twilley, D. Bone, D.L. Childers, C. Coronado-Molina, I.C. Feller, J.A. Herrerra-Silviera, R. Jaffe, J.E. Mancera, E. Rejmankova, and J.E. Salisbury. 2004. A conceptual framework to develop long-term ecological research and management objectives in the wider Caribbean Region. BioScience 54: 843-856.

Scully, N.M., N. Maie, S. Dailey, J. Boyer, R.D. Jones, and R. Jaffe. 2004. Early diagenesis of plant-derived dissolved organic matter along a wetland, mangrove, estuary ecotone. Limnology and Oceanography 49: 1667-1678.

Stevenson, C., and D.L. Childers. 2004. Hydroperiod and seasonal effects on fish decomposition in an oligotrophic Everglades marsh. Wetlands 24: 529-537.

Zieman, J.C., J.W. Fourqurean, and T.A. Frankovich. 2004. Reply to B. E. Lapointe and P. J. Bariles comment on our paper Seagrass die-off in Florida Bay: long term trends in abundance and growth of turtlegrass, Thalassia testudinum. Estuaries 27: 165-172.

Anderson, W.T., and J.W. Fourqurean. 2003. Intra- and interannual variability in seagrass carbon and nitrogen stable isotopes from south Florida, a preliminary study. Organic Geochemistry 34: 185-194.

Barr, J.G., J.D. Fuentes, N. Wang, Y. Edmonds, J.C. Zieman, B.P. Hayden, and D.L. Childers. 2003. Red mangroves emit hydrocarbons. Southeastern Naturalist 2: 499-510.

Beck, M.W., K.L. HeckJr., K.W. Able, D.L. Childers, D.B. Eggleston, B.M. Gillanders, B.S. Halpern, C.G. Hays, K. Hoshino, T.J. Minello, R.J. Orth, P.F. Sheridan, and M.P. Weinstein. 2003. The role of nearshore ecosystems as fish and shellfish nurseries. Issues in Ecology 11: 1-12.

Childers, D.L., R.F. Doren, G.B. Noe, M. Rugge, and L.J. Scinto. 2003. Decadal change in vegetation and soil phosphorus patterns across the Everglades landscape. Journal of Environmental Quality 32: 344-362.

Davis, S.E., C. Coronado-Molina, D.L. Childers, and J.W. Day. 2003. Temporally dependent C, N, and P dynamics associated with the decay of Rhizophora mangle L. leaf litter in oligotrophic mangrove wetlands of the Southern Everglades. Aquatic Botany 75: 199-215.

Davis, S.E., D.L. Childers, J.W. Day, D.T. Rudnick, and F.H. Sklar. 2003. Factors affecting the concentration and flux of materials in two southern Everglades mangrove wetlands. Marine Ecology Progress Series 253: 85-96.

Fourqurean, J.W., and J. Schrlau. 2003. Changes in nutrient content and stable isotope ratios of C and N during decomposition of seagrasses and mangrove leaves along a nutrient availability gradient in Florida Bay, USA. Chemistry and Ecology 19: 373-390.

Fourqurean, J.W., J.N. Boyer, M.J. Durako, L.N. Hefty, and B.J. Peterson. 2003. Forecasting the response of seagrass distribution to changing water quality: statistical models from monitoring data. Ecological Applications 13: 474-489.

Happell, J.D., R.M. Price, Z. Top, and P.K. Swart. 2003. Evidence for the removal of CFC-11, CFC-12, and CFC-113 at the ground water-surface water interface in the Everglades. Journal of Hydrology 279: 94-105.

Lockwood, J.L., M.S. Ross, and J.P. Sah. 2003. Smoke on the water: the interplay of fire and water flow on Everglades restoration. Frontiers in Ecology and the Environment 1: 462-468.

Lu, X.Q., N. Maie, J.V. Hanna, D.L. Childers, and R. Jaffe. 2003. Molecular characterization of dissolved organic matter in freshwater wetlands of the Florida Everglades. Water Research 37: 2599-2606.

Noe, G.B., L.J. Scinto, J. Taylor, D.L. Childers, and R.D. Jones. 2003. Phosphorus cycling and partitioning in an oligotrophic Everglades wetland ecosystem: a radioisotope tracing study. Freshwater Biology 48: 1993-2008.

Price, R.M., J.D. Happell, Z. Top, and P.K. Swart. 2003. Use of tritium and helium to define groundwater flow conditions in Everglades National Park. Water Resources Research 39: 1267.

Ross, M.S., D.R. Reed, J.P. Sah, P.L. Ruiz, and M. Lewin. 2003. Vegetation:environment relationships and water management in Shark Slough, Everglades National Park. Wetlands Ecology and Management 11: 291-303.

Baber, M.J., D.L. Childers, K.J. Babbitt, and D.H. Anderson. 2002. Controls on fish distribution and abundance in temporary wetlands. Canadian Journal of Fisheries and Aquatic Sciences 59: 1441-1450.

Fourqurean, J.W., and J.C. Zieman. 2002. Nutrient content of the seagrass Thalassia testudinum reveals regional patterns of relative availability of nitrogen and phosphorus in the Florida Keys, USA. Biogeochemistry 61: 229-245.

Noe, G.B., D.L. Childers, A.L. Edwards, E. Gaiser, K. Jayachandran, D. Lee, J. Meeder, J. Richards, L.J. Scinto, J.C. Trexler, and R.D. Jones. 2002. Short-term changes in phosphorus storage in an oligotrophic Everglades wetland ecosystem receiving experimental nutrient enrichment. Biogeochemistry 59: 239-267.

Peterson, B.J., C.D. Rose, L.M. Rutten, and J.W. Fourqurean. 2002. Disturbance and recovery following catastrophic grazing: studies of a successional chronosequence in a seagrass bed. Oikos 97: 361-370.

Swart, P.K., and R.M. Price. 2002. Origin of salinity variations in Florida Bay. Limnology and Oceanography 47: 1234-1241.

Troxler-Gann, T.. 2002. Response of Everglades tree islands to increased freshwater flow (Florida). Ecological Restoration 20: 211-212.

Chambers, R.M., J.W. Fourqurean, S.A. Macko, and R. Hoppenot. 2001. Biogeochemical effects of iron availability on primary producers in a shallow marine carbonate environment. Limnology and Oceanography 46: 1278-1286.

Jaffe, R., R. Mead, M.E. Hernandez, M.C. Peralba, and O.A. DiGuida. 2001. Origin and transport of sedimentary organic matter in two subtropical estuaries: A comparative, biomarker-based study. Organic Geochemistry 32: 507-526.

Noe, G., D.L. Childers, and R.D. Jones. 2001. Phosphorus biogeochemistry and the impacts of phosphorus enrichment: Why are the Everglades so unique. Ecosystems 4: 603-624.

Swart, P.K., R.M. Price, and L. Greer. 2001. The relationship between stable isotopic variations (O,H, and C) and salinity in waters and corals from environments in South Florida: Implications for reading the paleoenvironmental record. Bulletins of American Paleontology 361: 17-29.

Master's Theses (79)

Hormiga, Samantha . 2024. Coastal carbon flux: Periphyton contributions and diatom indicators. Master's thesis, Florida International University.

Innocent, Hanna . 2024. The contrasting responses of phytoplankton and periphyton to spatially variable N:P ratios in a large, shallow hypereutrophic lake. Master's thesis, Florida International University.

King, Jordon . 2024. Water depth explains spatiotemporal patterns of metabolism and microbial community structure in flocculent organic matter of Everglades marshes. Master's thesis, Florida International University.

Trabelsi, Shakira . 2024. Effects of pharmaceutical exposure on wild fish health: A survey of Red Drum across Florida estuaries. Master's thesis, Florida International University.

McLeod, M. Grace. 2023. Fire history and climate drive patterns of post-fire recovery in fire-dependent subtropical upland ecosystems. Master's thesis, Florida International University.

Richey, Amanda . 2023. The effect of water level and salinity on carbon dynamics in a subtropical brackish ecotone wetland. Master's thesis, Florida International University.

Cordoba, Nicole . 2022. Hydrologic Properties of Mangrove and Sawgrass Peat in Shark River Slough, Everglades, Florida. Master's thesis, Florida International University.

Linenfelser, Joshua . 2022. Tracing the source of nutrients entering North Central Florida Bay: A Stable isotope approach. Master's thesis, Florida International University.

Viadero, Natasha . 2022. Between dry rock and a salty place: Freshwater species in a coastal environment facing climate change. Master's thesis, Florida International University.

Yu, Zhuoran . 2022. Biophysical factors and water dynamics impact methane fluxes in Everglades freshwater marshes. Master's thesis, University of Alabama.

Emery, Meredith . 2021. Reconstructing cyclical browning from diatom records in a subtropical lake. Master's thesis, Florida International University.

Shribman, Zoe . 2021. Blue carbon in south Florida’s mangroves: The role of large roots and necromass. Master's thesis, Louisiana State University.

Stansbury, Kaitlin . 2021. Drivers of extracellular polysaccharide production by a mat-forming diatom. Master's thesis, Florida International University.

Brown, Theresa Kelly. 2020. Taking apart the time machine: Investigating space-for-time substitution modeling in the Florida Everglades. Master's thesis, Florida International University.

Sullivan, Kristy Lee. 2020. Long-term drivers of phytoplankton assembly in a subtropical, monomictic lake. Master's thesis, Florida International University.

Eggenberger, Cody . 2019. Coupling telemetry and stable isotope techniques to unravel movement: Snook habitat use across variable nutrient environments. Master's thesis, Florida International University.

Massa, E.. 2019. Effects of phosphorous on benthic diatom assemblage network structure. Master's thesis, Florida International University.

Tasci, Yasemin . 2019. Modeled affinity constants for phosphorus adsorption and desorption due to saltwater intrusion. Master's thesis, University of South Florida.

Comparetto, Kailey . 2018. Carbon Burial in a Freshwater Marsh to Mangrove Transitional Area in Everglades National Park. Master's thesis, University of South Florida.

Ontkos, Alex . 2018. Habitat use of three abundant predatory fish species in the freshwater marshes of the Florida Everglades. Master's thesis, Florida International University.

Sarker, Shishir K.. 2018. Spatial and Temporal Distribution of Total Phosphorus Concentration in Soil and Surface Water in the Everglades Protection Area. Master's thesis, Florida International University.

Hill, Gregory . 2017. Examining Movement and Habitat Selection of Everglades Fishes in Response to Seasonal Water Levels. Master's thesis, Florida International University.

Reio, Dillon N.. 2017. Investigating the Effects of Land-Cover Change on the Hydrologic Conditions of a Restored Agricultureal Area in Everglades National Park. Master's thesis, Florida International University.

Bornhoeft, Sarah C.. 2016. Influence of Experimental Sheet Flow on Aquatic Food Webs of the Central Everglades. Master's thesis, Florida International University.

Danielson, Tess Marie. 2016. Everglades Mangrove Forest Response to Large-Scale Disturbance: Long-Term Assessment of Structural and Functional Properties. Master's thesis, Louisiana State University.

Huang, Wenxi . 2016. Characterizing the Molecular Structure and Reactivity of Natural Organic Matter in The Everglades. Master's thesis, Florida International University.

Schulte, Nicholas O.. 2016. Controls on benthic microbial community structure and assembly in a karstic coastal wetland. Master's thesis, Florida International University.

Kiger, Amber . 2015. Changing Bacterial Growth Efficiencies across a Natural Nutrient Gradient in an Oligotrophic Estuary. Master's thesis, Florida International University.

Lee, Jessica A.. 2015. Drying times: Integrating citizen science to examine survival of Florida Largemouth Bass in a coastal refuge habitat. Master's thesis, Florida International University.

Linden, Edward . 2015. Hydrologic Controls of Coastal Groundwater Discharge in Southern Taylor Slough, Everglades National Park, Florida. Master's thesis, Florida International University.

Kotkowski, Rachel . 2014. Environmental Influences on Bacterio-phytoplanktonic Coupling and Bacterial Growth Efficiency in a Sub-tropical Estuary. Master's thesis, Florida International University.

Pokharel, Shiva . 2014. Analysis of land use change as a method of predicting water demands in an urbanizing Environment: Redland, Miami-Dade County, Florida. Master's thesis, Florida International University.

Edwards, Christopher . 2013. Recreational Angler Perspectives of Nonnative Fish Species and Mercury Advisories. Master's thesis, Florida International University.

Gandy, David A.. 2013. Examining Gradients in Novelty: Native and Non-native Fish Assemblages in Everglades Canals. Master's thesis, Florida International University.

Isherwood, Ewan . 2013. The Effect of Contemporary Hydrologic Modification on Vegetation Community Composition Distinctness in the Florida Everglades. Master's thesis, Florida International University.

Sandoval, Estefania . 2013. Ten Year Study on Water Flushing Times and Water Quality in Southern Taylor Slough, Everglades National Park, FL. Master's thesis, Florida International University.

Breithaupt, Joshua L.. 2012. Organic Carbon Burial Rates in Mangrove Soils: Global Context and a Preliminary Investigation of the Coastal Everglades. Master's thesis, University of South Florida St. Petersburg.

Hijuelos, Ann C.. 2012. Spatial and temporal patterns in the distribution, behavior, and activity of fishes in the canals of the Everglades. Master's thesis, Florida International University.

Sarabia, Robin Elizabeth. 2012. Spatiotemporal variation in abundance and social structure of bottlenose dolphins in the Florida Coastal Everglades. Master's thesis, Florida International University.

Boucek, Ross . 2011. Resource Partitioning among Three Mesoconsumers at a Marsh Mangrove Ecotone: A Response to a Seasonal Resource Pulse Subsidy. Master's thesis, Florida International University.

Lopez, Diana P.. 2011. Trait Variation in an Everglades Invasive Species: Life histories, Boldness, and Dispersal in the African Jewelfish. Master's thesis, Florida International University.

Spence, V.A.. 2011. Estimating groundwater discharge in the oligohaline ecotone of the Everglades using temperature as a tracer and variable-density groundwater models. Master's thesis, University of South Florida.

Bernard, Rebecca . 2010. Effects of light and nutrient supply on stable isotopic composition and fractionation in N-limited seagrass beds. Master's thesis, Florida International University.

Jimenez, Kristine L.. 2010. A Comparison of CO2 Exchange Rates for Long- and Short-Hydroperiod Everglades Marshes. Master's thesis, University of Alabama.

Munyon, Jay . 2010. The effects of hydrology and phosphorus on Everglades productivity. Master's thesis, Florida International University.

Dunlop, Katherine . 2009. Examination of cue utilization & anti-predator responses by native Everglades taxa to a non-native predator, the African jewelfish. Master's thesis, Nova Southeastern University Oceanographic Center.

McCarthy, Lauren . 2009. Segregation of palaemonid shrimp species along a salinity gradient in Shark River, Everglades National Park. Master's thesis, Nova Southeastern University Oceanographic Center.

Sanchez, Michelle. 2009. Distribution of Particle Organic Material in Biscayne Bay. Master's thesis, Florida International University.

Zapata-Rios, Xavier . 2009. Groundwater/surface water interactions in Taylor Slough-Everglades National Park. Master's thesis, Florida International University.

Hanan, Erin J.. 2008. Multi-Scaled Patterning of Plant-Soil-Water Interactions across Tree Islands and Marshes within the Prairie and Slough Landscapes of Everglades National Park. Master's thesis, Florida International University.

Iwaniec, David M.. 2008. Regulation and Organization of Periphyton from the Florida Everglades, U.S.A. Master's thesis, Florida International University.

Tsai, Cheng-Feng . 2008. Application of the HYMAN Model to evaluate the water and salt budgets in three mangrove sites along Shark River, Everglades. Master's thesis, Louisiana State University.

Delius, Bryan K.. 2007. Distribution and trophic position of juvenile bull sharks in an oligotrophic estuary. Master's thesis, Florida International University.

Green, David P.J.. 2007. Community structure and physiological stresses of oligohaline zone fishes in south Florida. Master's thesis, Florida International University.

Mir-Gonzalez, Danielle . 2007. Groundwater nutrient availability controls on nearshore benthic community structure in Biscayne Bay, Florida. Master's thesis, Florida International University.

Reed, David . 2007. Effects of hydrology and light on seedling establishment and growth of four wetland tree species in tree islands of northern Shark Slough, Everglades National Park. Master's thesis, Florida International University.

Barr, Dane . 2006. Incorporating tidal energy advection into the energy balance for a mangrove forest in the Florida Everglades. Master's thesis, University of Virginia.

Byron, Dorothy A.. 2006. Determining the physiological response of a subtropical seagrass, Thalassia Testudinum, to salinity stress using pulse amplitude modulated (PAM) fluorometry. Master's thesis, Florida International University.

Cornett, Virginia C.. 2006. Spatial distribution of submerged aquatic vegetation in the Shark River Estuary and implications for understanding movement and feeding patterns of manatees (Tichechus manatus latirostris). Master's thesis, Florida International University.

Cunniff, Kevin M.. 2006. Phenology, sexual reproduction, and the factors affecting sexual reproduction of the marine angiosperm, Thalassia testudinum, in the Florida Keys National Marine Sanctuary (FKNMS). Master's thesis, Florida International University.

Dewsbury, Bryan M.. 2006. Artificially induced aggregation of fish and their effects on nutrient regimes and primary producers in an oligotrophic subtropical estuary. Master's thesis, Florida International University.

Goss, Charles . 2006. Fish colonization of temporary wetlands in the context of the Everglades landscape. Master's thesis, Florida International University.

Juszli, Gregory M.. 2006. Patterns in belowground primary productivity and belowground biomass in marshes of the Everglades' oligohaline ecotone. Master's thesis, Florida International University.

Ruiz Halpern, Sergio . 2006. Response of the seagrass Thalassia testudinum to experimental manipulations of sedimentary iron and organic matter in a subtropical carbonate environment. Master's thesis, Florida International University.

Gibson, Patrick J.. 2005. Volume transport and nutrient loading between Florida Bay and the Florida Keys National Marine Sanctuary though Long Key Channel. Master's thesis, Florida International University.

Poret, Nicole . 2005. Belowground decomposition of mangrove roots in the Florida Coastal Everglades. Master's thesis, University of Louisiana at Lafayette.

Rogers, Matthew . 2005. Bacterivory, growth rates, and bacterial abundance in Florida Bay. Master's thesis, Florida International University.

Romigh, Melissa . 2005. Organic carbon flux at the mangrove soil-water column interface in the Florida Coastal Everglades. Master's thesis, Texas A&M University.

Stanaway, Kathryn . 2005. The effects of microbial mats on sediment nutrient fluxes in Florida Bay, USA. Master's thesis, Florida International University.

Vlaar, Theo . 2005. Hydrologic conditions of the Shark Estuary in relation to regional physical forcings in the Everglades. Master's thesis, Larenstein University.

Wood, Adam . 2005. Dynamics of detrital particulate organic material in the ridge and slough landscape of the Everglades. Master's thesis, Florida International University.

Rubio, Gustavo . 2004. Macrophyte decomposition and litter fall dynamics in the Everglades ecotones. Master's thesis, Florida International University.

Stuhar, Martha Elizabeth. 2004. Relationship between soil moisture and nutrient availability in tree islands of Shark Slough, Everglades National Park. Master's thesis, Florida International University.

Williams, Alissa Jade. 2004. Hydrology and primary production influence food-web patterns in the Florida Everglades. Master's thesis, Florida International University.

Cormier, Nicole . 2003. Belowground productivity in mangrove forests of Pohnpei and Kosrae, Federated States of Micronesia. Master's thesis, University of Louisiana at Lafayette.

Ferdie, Meredith . 2002. Nutrient limitation of benthic primary production in the upper Florida Keys. Master's thesis, Florida International University.

Yang, Chengyong . 2002. Molecular characterization of dissolved organic matter in the Florida coastal Everglades. Master's thesis, Florida International University.

Gann, Tiffany Troxler. 2001. Investigating tree island community response to increased freshwater flow in the Southern Everglades. Master's thesis, Florida International University.

Stevenson, Christine Elizabeth. 2001. Fish decomposition and the role of fish detritus in nutrient cycling within an oligotrophic Everglades freshwater marsh. Master's thesis, Florida International University.

Ph.D. Dissertations (83)

Chavez, Selena . 2024. Remote sensing analyses of the impact of the 2017 Hurricane Irma on the mangrove forests in the South Florida Everglades. Ph.D. dissertation, Florida International University.

Lamb-Wotton, Lukas . 2024. Multi-scale evaluation of coastal marsh loss in the Florida Everglades. Ph.D. dissertation, Florida International University.

Vorseth, Chloe . 2024. Estimating the economic value of recreational fishing and water management in Lake Okeechobee, Florida. Ph.D. dissertation, Florida International University.

Anderson, Kenneth . 2023. Carbon processing by benthic and pelagic microbial communities under changing hydrologic pulses and presses in coastal wetlands. Ph.D. dissertation, Florida International University.

Anjuman, Afia . 2023. Characterization of dissolved organic matter percolated from periphyton in Everglades and interaction with mercury. Ph.D. dissertation, Florida International University.

Castillo, Nicholas . 2023. Examining the threat of pharmaceutical contaminants to bonefish (Albula vulpes) throughout South Florida and the Caribbean Basin. Ph.D. dissertation, Florida International University.

Garcia Barcia, L.. 2023. Investigating mercury and selenium interactions in sharks and shark-derived products to improve health risk assessments. Ph.D. dissertation, Florida International University.

Massie, Jordan . 2023. Patterns and cues in the riverine movements of Common Snook: Investigating the role of environmental variation and disturbance on migrations and resource use in the Florida Everglades. Ph.D. dissertation, Florida International University.

Onwuka, Ikechukwu . 2023. Effects of discharge on water quality and sediments in South Florida’s Everglades canals. Ph.D. dissertation, Florida International University.

Rodemann, Jonathan . 2023. How do fish use seascapes: drivers and consequences of spatial patterning of submerged habitats in Florida Bay. Ph.D. dissertation, Florida International University.

Wagner Coello, Helen Urpi. 2023. Citizen science as a gateway for mosquito monitoring in Miami-Dade County households. Ph.D. dissertation, Florida International University.

Flood, Peter . 2022. Spatial and temporal trophic dynamics and energy fluxes in response to ecosystem engineering and invasive species. Ph.D. dissertation, Florida International University.

Gervasi Bloom, Carissa . 2022. Observation to Action: A Stakeholder Driven Analysis and Assessment of a Data-Limited Fishery. Ph.D. dissertation, Florida International University.

Jordan, Deidra . 2022. A Multi Taxa Metagenomic Evaluation of the Everglades Soil Microbiome and the Impact of Salinity on Community Structure and Biogeochemical Cycles with a Soil Forensic Application. Ph.D. dissertation, Florida International University.

Paz, Valeria . 2022. Investigating Trophic Interactions, Habitat Use, and Pollution Loads of Bottlenose Dolphins (Tursiops Truncatus) in the Florida Coastal Everglades. Ph.D. dissertation, Florida International University.

Zhang, Boya . 2022. Hydrological and Ecological Synthetic Aperture Radar (SAR) Applications for the Everglades Wetland Ecosystem. Ph.D. dissertation, Florida International University.

Bernardo, Melissa . 2021. Actually-existing resilience: The adaptive actions of Miami’s Redland Farmers and potential pathways for transformation. Ph.D. dissertation, Florida International University.

Smith, Matthew . 2021. Quantifying how coastal flooding and stormwater runoff drive spatiotemporal variability in carbon and nutrient processing in urban aquatic ecosystems. Ph.D. dissertation, Florida International University.

Zhao, Xiaochen . 2021. Assessing mangrove wetland structure and function regulated by environmental gradients under climate change and increasing human impacts: A modeling approach. Ph.D. dissertation, Louisiana State University.

Abiy, Anteneh . 2020. Modeling drought, drought teleconnection, and its effect on groundwater level dynamics in the Biscayne Aquifer. Ph.D. dissertation, Florida International University.

James, W. Ryan. 2020. A seascape approach to understanding coastal food web dynamics and species distributions. Ph.D. dissertation, University of Louisiana at Lafayette.

Strickland, Bradley . 2020. Beyond predation: How do consumers impact bottom-up processes in ecosystems? Ph.D. dissertation, Florida International University.

Gatto, John . 2019. Incorporating early life history and recruitment in the analysis of population dynamics of marsh fish. Ph.D. dissertation, Florida International University.

Blanchard, Jesse . 2018. A confluence of invasion, behavioral, and theoretical ecology: What drives ephemeral metacommunity re-assembly? Ph.D. dissertation, Florida International University.

Charles, Sean . 2018. Saltwater Intrusion and Vegetation Change Drive Changes in Carbon Storage in Coastal Wetlands. Ph.D. dissertation, Florida International University.

Clasen, Hunter . 2018. Flow and Transport in Low-Gradient Rivers and Estuaries. Ph.D. dissertation, University of South Florida.

Howard, Jason . 2018. Patterns of Carbon Metabolism, Storage, and Remineralization in Seagrass Ecosystems. Ph.D. dissertation, Florida International University.

Mazzei, Viviana . 2018. Diatoms as Tools for Tracking Changing Environmental Gradients in Coastal Freshwater Wetlands Threatened by Saltwater Intrusion. Ph.D. dissertation, Florida International University.

Roebuck, Alan . 2018. Environmental Dynamics of Dissolved Organic Matter and Dissolved Black Carbon in Fluvial Systems: Linking Biogeochemistry to Land Use. Ph.D. dissertation, Florida International University.

Sanchez Montelongo, Jessica Lynn. 2018. The adaptive evolution of herbivory in freshwater systems. Ph.D. dissertation, Florida International University.

Servais, Shelby . 2018. Changes in Soil Microbial Functioning in Coastal Wetlands Exposed to Environmental Subsidies and Stressors. Ph.D. dissertation, Florida International University.

Wilson, Benjamin . 2018. Drivers and Mechanisms of Peat Collapse in Coastal Wetlands. Ph.D. dissertation, Florida International University.

Breithaupt, Joshua L.. 2017. Spatio-temporal Dynamics of Soil Composition and Accumulation Rates in Mangrove Wetlands. Ph.D. dissertation, University of South Florida.

Bush, Michael Ross. 2017. Experimental analysis of the effects of hydroscape structure on fishes in a dynamic wetland. Ph.D. dissertation, Florida International University.

Regier, Peter . 2017. Linking organic matter dynamics to management, restoration and climate in the Florida Everglades . Ph.D. dissertation, Florida International University.

Yoder, Landon . 2017. Restoring Everglades Water Quality: Analyzing the Institutional Dimensions of Agricultural Water Management. Ph.D. dissertation, Indiana University.

Boucek, Ross . 2016. Investigating sub-tropical community resistance and resilience to climate disturbance. Ph.D. dissertation, Florida International University.

Sweatman, Jennifer Lynn. 2016. Gammaridean amphipods as bioindicators in subtropical seagrass ecosystems. Ph.D. dissertation, Florida International University.

Wendelberger, Kristie S.. 2016. Evaluating Plant Community Response to Sea Level Rise and Anthropogenic Drying: Can Life Stage and Competitive Ability be Used as Indicators in Guiding Conservation Actions? Ph.D. dissertation, Florida International University.

Feliciano, Emanuelle A.. 2015. Multi-scale Remote Sensing Assessments of Forested Wetlands: Applications to Everglades National Park. Ph.D. dissertation, University of Miami.

Flower, Hilary . 2015. Phosphorus sorption dynamics in shallow groundwater, Coastal Everglades, Florida, USA. Ph.D. dissertation, University of South Florida.

Mic, Dumitrita Suzana. 2015. Producing Collaboration Through Community-Level Processes of Climate Change and Water Management Planning. Ph.D. dissertation, Florida International University.

Dewsbury, Bryan M.. 2014. The Ecology and Economics of Seagrass Community Structure. Ph.D. dissertation, Florida International University.

Harrison, Elizabeth . 2014. Analyzing invasion success of the Mayan Cichlid (Cichlasoma urophthalmus) in southern Florida. Ph.D. dissertation, Florida International University.

He, Ding . 2014. Application of Biomarkers and Compound Specific Stable Isotopes for the Assessment of Hydrology as a Driver of Organic Matter Dynamics in the Everglades Ecosystem. Ph.D. dissertation, Florida International University.

Lagomasino, David . 2014. Ecohydrology, evapotranspiration and hydrogeochemistry of carbonate mangrove wetlands. Ph.D. dissertation, Florida International University.

Lee, Sylvia . 2014. Mechanisms of Diatom Assembly in a Hydrologically-Managed Subtropical Wetland. Ph.D. dissertation, Florida International University.

Mahmoudi, Mehrnoosh . 2014. Numerical Modeling of the Effects of Hydrologic Conditions and Sediment Transport on Geomorphic Patterns in Wetlands. Ph.D. dissertation, Florida International University.

Malone, Sparkle . 2014. Hydrology drives Everglades ecosystem function: implications for ecosystem vulnerability to drought, energy balance, climate teleconnections and climate change. Ph.D. dissertation, University of Alabama.

Matich, Philip . 2014. Environmental and individual factors shaping the habitat use and trophic interactions of juvenile bull sharks (Carcharhinus leucas) in a subtropical estuary. Ph.D. dissertation, Florida International University.

Nodine, Emily . 2014. Evidence of climate variability and tropical cyclone activity from diatom assemblage dynamics in coastal southwest Florida. Ph.D. dissertation, Florida International University.

Ya, Chao . 2014. Sources, Fate and Transformation of Organic Matter in Wetlands and Estuaries. Ph.D. dissertation, Florida International University.

Ding, Yan . 2013. Environmental Dynamics of Dissolved Black Carbon in Aquatic Ecosystems. Ph.D. dissertation, Florida International University.

Garvoille, Rebecca . 2013. Sociocultural Complexities of Ecosystem Restoration: Remaking Identity, Landscape and Belonging in the Florida Everglades. Ph.D. dissertation, Florida International University.

Rosenblatt, Adam . 2013. Factors Influencing Movements and Foraging Ecology of American Alligators (Alligator mississippiensis) in a Dynamic Subtropical Coastal Ecosystem. Ph.D. dissertation, Florida International University.

Campbell, Justin . 2012. The Effects of carbon dioxide fertilization on the ecology of tropical seagrass communities. Ph.D. dissertation, Florida International University.

Koch, Gregory . 2012. Dynamics of Ecosystem Metabolism and Flocculent Detritus Transport in Estuarine Taylor River. Ph.D. dissertation, Florida International University.

Chen, Meilian. 2011. Characterization, Sources, and Transformations of Dissolved Organic Matter (DOM) in the Florida Coastal Everglades (FCE). Ph.D. dissertation, Florida International University.

Halun, Sitti Zayda B.. 2011. The Effects of Fertilization and Simulated Grazing on the Community Structure of a Seagrass Bed in South Florida. Ph.D. dissertation, Florida International University.

Pisani, Oliva. 2011. Local Biomass Control on the Composition and Reactivity of Particulate Organic Matter in Aquatic Environments. Ph.D. dissertation, Florida International University.

Sullivan, Pamela . 2011. Groundwater-Surface Water Interactions on Tree Islands in the Everglades, South Florida. Ph.D. dissertation, Florida International University.

Castañeda, Edward . 2010. Landscape patterns of community structure, biomass and net primary productivity of mangrove forests in the Florida Coastal Everglades as a function of resources, regulators, hydroperiod, and hurricane disturbance. Ph.D. dissertation, Louisiana State University.

Josette Marie La Hee. 2010. The Influence of phosphorus on periphyton mats from the Everglades and three tropical karstic wetlands. Ph.D. dissertation, Florida International University.

Ruehl, Clifton B.. 2010. The interactive effects of predators, resources, and disturbance on freshwater snail populations from the Everglades. Ph.D. dissertation, Florida International University.

Stringer, Christina Elaine. 2010. Hydrologic Controls on Salinity in Mangroves and Lagoons. Ph.D. dissertation, University of South Florida.

Quillen, Amanda Kay. 2009. Diatom-Based paleolimnological reconstruction of Quaternary environments in a Florida sinkhole lake. Ph.D. dissertation, Florida International University.

Wachnicka, Ania . 2009. Quantitative diatom-based reconstruction of paleoenvironmental conditions in Florida Bay and Biscayne Bay, U.S.A. Ph.D. dissertation, Florida International University.

Evans, Samantha . 2008. Carbon and nitrogen stable isotope patterns in South Florida coastal ecosystems: Modern and paleoceanographic perspectives. Ph.D. dissertation, Florida International University.

Stalker, Jeremy. 2008. Hydrological Dynamics Between a Coastal Aquifer and the Adjacent Estuarine System, Biscayne Bay, South Florida. Ph.D. dissertation, Florida International University.

Williams, Clayton . 2008. Relative significance of pelagic, benthic, and allochthonous organic matter to microbial carbon cycling in a phosphorus-depleted subtropical estuary (Florida Bay). Ph.D. dissertation, Florida International University.

Gao, Min . 2007. Chemical characterization of soil organic matter in an oligotrophic, subtropical, freshwater wetland system: Sources, diagenesis and preservation. Ph.D. dissertation, Florida International University.

Frankovich, Thomas A.. 2006. Epiphyte light transmission relationships and biological and physicochemical influences on seagrass epiphyte standing stock and community composition. Ph.D. dissertation, University of Virginia.

Wozniak, Jeffrey R.. 2006. Quantifying nitrogen cycling rates in freshwater marshes of the southern Everglades using 15N tracer techniques. Ph.D. dissertation, Florida International University.

Barr, Jordan G.. 2005. Carbon assimilation by riverine mangroves in the Florida Everglades. Ph.D. dissertation, University of Virginia.

Troxler-Gann, Tiffany . 2005. Investigating biogeochemical connectivity in a complex wetland landscape: N sources and mechanisms of N sequestration in forested islands of the southern Everglades. Ph.D. dissertation, Florida International University.

Whelan, Kevin . 2005. The successional dynamics of lightning-initiated canopy gaps in the mangrove forests of Shark River, Everglades National Park, USA. Ph.D. dissertation, Florida International University.

Xu, Yunping . 2005. Origin, transport and fate of organic matter in Florida Bay: A biomarker record of historical environmental changes. Ph.D. dissertation, Florida International University.

Cardona-Olarte, Pablo . 2004. Responses of neotropical mangrove seedlings to environmental regulators. Ph.D. dissertation, University of Louisiana at Lafayette.

Krauss, Kenneth W.. 2004. Growth, photosynthetic, and water use characteristics of south Florida mangrove vegetation in response to varying hydroperiod. Ph.D. dissertation, University of Louisiana at Lafayette.

Smith, Shawn Elizabeth. 2004. Defining the role of floating periphyton mats in shaping food-web dynamics in the Florida Everglades. Ph.D. dissertation, Florida International University.

Gottlieb, Andrew David. 2003. Short and long hydroperiod Everglades periphyton mats: community characterization and experimental hydroperiod manipulation. Ph.D. dissertation, Florida International University.

Mancera-Pineda, Jose Ernesto. 2003. The contribution of mangrove outwelling to coastal food webs as a function of environmental settings . Ph.D. dissertation, University of Louisiana at Lafayette.

Mead, Ralph N.. 2003. Organic matter dynamics in the Florida coastal Everglades : A molecular marker and isotopic approach. Ph.D. dissertation, Florida International University.



Number of books: 8
Number of book chapters: 67
Number of journal articles: 770
Number of Master's theses: 79
Number of Ph.D. dissertations: 83