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Mangrove leaf physiological response to local climate at Key Largo, Watson River Chickee, Taylor Slough, and Little Rabbit Key, South Florida (FCE) from July 2001 to August 2001


At a Glance


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Authors: Jordan Barr, Jose Fuentes, Joseph Zieman
Time period: 2001-07-19 to 2001-08-13
Package id: knb-lter-fce.1148.3
Dataset id: ST_PP_Barr_003

How to cite:
Barr, J., J. Fuentes, J. Zieman. 2024. Mangrove leaf physiological response to local climate at Key Largo, Watson River Chickee, Taylor Slough, and Little Rabbit Key, South Florida (FCE) from July 2001 to August 2001. Environmental Data Initiative. https://doi.org/10.6073/pasta/82f6becbd659b3ef4656fc0cd1d7d73c. Dataset accessed 2024-11-21.

Geographic Coverage


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Detailed Metadata


  • Dataset Creator(s)

    • Name: Dr. Jose Fuentes 
    • Position: Project PI
    • Organization: Florida Coastal Everglades LTER Program
    • Address: The Pennsylvania State University
      Department of Meteorology
      University Park, PA 16802 USA
    • Phone: 814-863-1585
    • Email: jdfuentes@psu.edu
    • URL: http://micromet.psu.edu

    • Name: Dr. Joseph Zieman 
    • Position: Project Collaborator
    • Organization: Florida Coastal Everglades LTER Program
    • Address: Department of Environmental Sciences
      Clark Hall
      University of Virginia
      Charlottesville, VA 22903 USA
    • Phone: 434-924-0570
    • Fax: 434-924-7761
    • Email: jcz@virginia.edu
    • URL: http://www.evsc.virginia.edu/

  • Dataset Abstract
    Determine the red mangrove leaf physiological response to the local climate to understand the local controls on plant physiology. Data were collected in the Key Largo Ranger Station, Watson River Chickee and Taylor Slough research Sites, South Florida.
  • Geographic Coverage
    Study Extent Description
    The Study Extent of this dataset includes the Key Largo Ranger Station, Watson River Chickee and Taylor Slough research Sites, South Florida

    Bounding Coordinates
    Key Largo Ranger Station
    N: 25.087, S: 25.087, E: -80.451, W: -80.451

    Watson River Chickee
    N: 25.333, S: 25.333, E: -80.979, W: -80.979

    Little Rabbit Key
    N: 24.982, S: 24.982, E: -80.826, W: -80.826

    TS/Ph3
    N: 25.25240534, S: 25.25240534, E: -80.66271768, W: -80.66271768

    TS/Ph6b
    N: 25.21609115, S: 25.21609115, E: -80.65101654, W: -80.65101654

    FCE LTER Sites
    TS/Ph6b, TS/Ph3

  • Attributes
    • Data Table:   Mangrove leaf physiological response to local climate at Key Largo, Watson River Chickee, Taylor Slough, and Little Rabbit Key, South Florida (FCE)
      Attribute Name:
      FileNum
      Attribute Label:
      ID Number
      Attribute Definition:
      File ID Number
      Storage Type:
      ordinal
      Measurement Scale:
      text
      Missing Value Code:
       

      Attribute Name:
      SITENAME
      Attribute Label:
      sitename
      Attribute Definition:
      Name of Collection Site
      Storage Type:
      text
      Measurement Scale:
      text
      Missing Value Code:
       

      Attribute Name:
      SiteLocation
      Attribute Label:
      location
      Attribute Definition:
      Sample Collection Location
      Storage Type:
      text
      Measurement Scale:
      text
      Missing Value Code:
       

      Attribute Name:
      Obs
      Attribute Label:
      ID number
      Attribute Definition:
      Observation ID Number
      Storage Type:
      ordinal
      Measurement Scale:
      text
      Missing Value Code:
       

      Attribute Name:
      Time
      Attribute Label:
      time
      Attribute Definition:
      Collection Time
      Storage Type:
      nominal
      Measurement Scale:
      text
      Missing Value Code:
       

      Attribute Name:
      Ai
      Attribute Label:
      rate
      Attribute Definition:
      Net Assimilation Rate
      Storage Type:
      data
      Measurement Scale:
      Units: microMolesPerMetersSquaredPerSecond
      Precision: 0.01
      Number Type: real
      Missing Value Code:
      -9999.00 (Value will never be recorded)

      Attribute Name:
      Cond
      Attribute Label:
      conductance
      Attribute Definition:
      Total Water Vapor Conductance
      Storage Type:
      data
      Measurement Scale:
      Units: millimolesPerSquareMeterPerSecond
      Precision: 0.0001
      Number Type: real
      Missing Value Code:
      -9999.0000 (Value will never be recorded)

      Attribute Name:
      Ci
      Attribute Label:
      concentration
      Attribute Definition:
      Intracellular CO2 Concentration
      Storage Type:
      data
      Measurement Scale:
      Units: microMolesPerMetersSquaredPerSecond
      Precision: 1
      Number Type: real
      Missing Value Code:
      -9999 (Value will never be recorded)

      Attribute Name:
      Trmmol
      Attribute Label:
      rate
      Attribute Definition:
      Water Transpiration Rate
      Storage Type:
      data
      Measurement Scale:
      Units: millimolesPerSquareMeterPerSecond
      Precision: 0.001
      Number Type: real
      Missing Value Code:
      -9999.000 (Value will never be recorded)

      Attribute Name:
      Vpdl
      Attribute Label:
      pressure
      Attribute Definition:
      Leaf Vapor Pressure Deficit
      Storage Type:
      data
      Measurement Scale:
      Units: kilopascal
      Precision: 0.01
      Number Type: real
      Missing Value Code:
      -9999.00 (Value will never be recorded)

      Attribute Name:
      Area
      Attribute Label:
      area
      Attribute Definition:
      Enclosed Leaf Surface Area
      Storage Type:
      data
      Measurement Scale:
      Units: squareCentimeters
      Precision: 1
      Number Type: real
      Missing Value Code:
      -9999 (Value will never be recorded)

      Attribute Name:
      Strat
      Attribute Label:
      ratio
      Attribute Definition:
      Stomatal Ratio Parameter K
      Storage Type:
      data
      Measurement Scale:
      Units: dimensionless
      Precision: 1
      Number Type: real
      Missing Value Code:
      -9999 (Value will never be recorded)

      Attribute Name:
      Strat2
      Attribute Label:
      ratio
      Attribute Definition:
      Stomatal Ratio Parameter K Redundant
      Storage Type:
      data
      Measurement Scale:
      Units: dimensionless
      Precision: 1
      Number Type: real
      Missing Value Code:
      -9999 (Value will never be recorded)

      Attribute Name:
      Blcond
      Attribute Label:
      conductance
      Attribute Definition:
      Boundary Layer Conductance
      Storage Type:
      data
      Measurement Scale:
      Units: molePerSquareMeterPerSecond
      Precision: 0.01
      Number Type: real
      Missing Value Code:
      -9999.00 (Value will never be recorded)

      Attribute Name:
      Tair
      Attribute Label:
      temperature
      Attribute Definition:
      Air Temperature
      Storage Type:
      data
      Measurement Scale:
      Units: celsius
      Precision: 0.01
      Number Type: real
      Missing Value Code:
      -9999.00 (Value will never be recorded)

      Attribute Name:
      Tleaf
      Attribute Label:
      temperature
      Attribute Definition:
      Leaf Surface Temperature
      Storage Type:
      data
      Measurement Scale:
      Units: celsius
      Precision: 0.01
      Number Type: real
      Missing Value Code:
      -9999.00 (Value will never be recorded)

      Attribute Name:
      Tblk
      Attribute Label:
      temperature
      Attribute Definition:
      Cuvette Block Temperature
      Storage Type:
      data
      Measurement Scale:
      Units: celsius
      Precision: 0.01
      Number Type: real
      Missing Value Code:
      -9999.00 (Value will never be recorded)

      Attribute Name:
      CO2R
      Attribute Label:
      ratio
      Attribute Definition:
      Reference Cell CO2 Mixing Ratio
      Storage Type:
      data
      Measurement Scale:
      Units: microMolesPerMole
      Precision: 0.1
      Number Type: real
      Missing Value Code:
      -9999.0 (Value will never be recorded)

      Attribute Name:
      CO2S
      Attribute Label:
      ratio
      Attribute Definition:
      Sample Cell CO2 Mixing Ratio
      Storage Type:
      data
      Measurement Scale:
      Units: microMolesPerMole
      Precision: 0.1
      Number Type: real
      Missing Value Code:
      -9999.0 (Value will never be recorded)

      Attribute Name:
      H20R
      Attribute Label:
      ratio
      Attribute Definition:
      Reference Cell H2O Mixing Ratio
      Storage Type:
      data
      Measurement Scale:
      Units: microMolesPerMole
      Precision: 0.001
      Number Type: real
      Missing Value Code:
      -9999.000 (Value will never be recorded)

      Attribute Name:
      H20S
      Attribute Label:
      ration
      Attribute Definition:
      Sample Cell H2O Mixing Ratio
      Storage Type:
      data
      Measurement Scale:
      Units: microMolesPerMole
      Precision: 0.001
      Number Type: real
      Missing Value Code:
      -9999.000 (Value will never be recorded)

      Attribute Name:
      RhR
      Attribute Label:
      relative humidity
      Attribute Definition:
      Relative Humidity in Reference Cell
      Storage Type:
      data
      Measurement Scale:
      Units: percent
      Precision: 0.01
      Number Type: real
      Missing Value Code:
      -9999.00 (Value will never be recorded)

      Attribute Name:
      RhS
      Attribute Label:
      relative humidity
      Attribute Definition:
      Relative Humidity in Sample Cell
      Storage Type:
      data
      Measurement Scale:
      Units: percent
      Precision: 0.01
      Number Type: real
      Missing Value Code:
      -9999.00 (Value will never be recorded)

      Attribute Name:
      Flow
      Attribute Label:
      rate
      Attribute Definition:
      Molar Flow Rate through Cuvette
      Storage Type:
      data
      Measurement Scale:
      Units: microMolesPerSecond
      Precision: 0.1
      Number Type: real
      Missing Value Code:
      -9999.0 (Value will never be recorded)

      Attribute Name:
      PARi
      Attribute Label:
      PAR
      Attribute Definition:
      Photosynthetically Active Radiation in Cuvette
      Storage Type:
      data
      Measurement Scale:
      Units: microMolesPerMetersSquaredPerSecond
      Precision: 1
      Number Type: real
      Missing Value Code:
      -9999 (Value will never be recorded)

      Attribute Name:
      PARo
      Attribute Label:
      PAR
      Attribute Definition:
      Photosynthetically Active Radiation Measured by Quantum Sensor
      Storage Type:
      data
      Measurement Scale:
      Units: microMolesPerMetersSquaredPerSecond
      Precision: 1
      Number Type: real
      Missing Value Code:
      -9999 (Value will never be recorded)

      Attribute Name:
      Pressure
      Attribute Label:
      pressure
      Attribute Definition:
      Pressure in the Cuvette
      Storage Type:
      data
      Measurement Scale:
      Units: kilopascal
      Precision: 0.1
      Number Type: real
      Missing Value Code:
      -9999.0 (Value will never be recorded)

      Attribute Name:
      Csmch
      Attribute Label:
      offset
      Attribute Definition:
      CO2 Offset
      Storage Type:
      data
      Measurement Scale:
      Units: microMolesPerMole
      Precision: 0.0001
      Number Type: real
      Missing Value Code:
      -9999.0000 (Value will never be recorded)

      Attribute Name:
      Hsmch
      Attribute Label:
      offset
      Attribute Definition:
      H2O Offset
      Storage Type:
      data
      Measurement Scale:
      Units: millimolesPerSquareMeterPerSecond
      Precision: 0.0001
      Number Type: real
      Missing Value Code:
      -9999.0000 (Value will never be recorded)


  • Methods
    Sampling Description
    Gas samples were taken from 6 sq. cm sections on individual leaves. These leaves were always sampled from the surface to about 2.5 m height and leaves were selected that received direct sunlight.

    Method Step

    Description
    The flux of carbon dioxide and water vapor was monitored from a number of leaves. Fluxes were only measured once a steady state value was reached. This typically took about 30 seconds to 60 seconds to occur.

    Instrumentation
    LiCor 6400 Gas Exchange system equipped with a red/blue light source in the sensor head.

    Quality Control
    Dataset is inspected by PI for QA/QC; standard validation checks for negative numbers, graphs to detect potential outliers .
  • Distribution and Intellectual Rights
    Online distribution
    https://pasta.lternet.edu/package/data/eml/knb-lter-fce/1148/3/01b5b4e20cc9fafe3dd51aedd4326e13
    Data Submission Date:  2002-08-15

    Intellectual Rights
    This information is released under the Creative Commons license - Attribution - CC BY (https://creativecommons.org/licenses/by/4.0/). The consumer of these data ("Data User" herein) is required to cite it appropriately in any publication that results from its use. The Data User should realize that these data may be actively used by others for ongoing research and that coordination may be necessary to prevent duplicate publication. The Data User is urged to contact the authors of these data if any questions about methodology or results occur. Where appropriate, the Data User is encouraged to consider collaboration or co-authorship with the authors. The Data User should realize that misinterpretation of data may occur if used out of context of the original study. While substantial efforts are made to ensure the accuracy of data and associated documentation, complete accuracy of data sets cannot be guaranteed. All data are made available "as is." The Data User should be aware, however, that data are updated periodically and it is the responsibility of the Data User to check for new versions of the data. The data authors and the repository where these data were obtained shall not be liable for damages resulting from any use or misinterpretation of the data. Thank you.

  • Keywords
    primary production, FCE, Florida Coastal Everglades LTER, ecological research, long-term monitoring, Everglades National Park, Key Largo Ranger Station, Watson River Chickee, Taylor Slough, Little Rabbit Key, leaf physiology, transpiration, photosynthesis, red mangroves, PAR
  • Data Table and Format
    Data Table:  Mangrove leaf physiological response to local climate at Key Largo, Watson River Chickee, Taylor Slough, and Little Rabbit Key, South Florida (FCE)

    Entity Name:
    ST_PP_Barr_003
    Entity Description:
    Mangrove leaf physiological response to local climate at Key Largo, Watson River Chickee, Taylor Slough, and Little Rabbit Key, South Florida (FCE)
    Object Name:
    ST_PP_Barr_003.csv
    Number of Header Lines:
    1
    Attribute Orientation:
    column
    Field Delimiter:
    ,
    Number of Records:
    5110