Dataset title:  FCE LTER Taylor Slough/Panhandle-7 Site Scrub Red Mangrove (Rhizophora mangle) Leaf Gas Exchange Data, Florida, USA from January-December 2019

Dataset ID:  doi:10.6073/pasta/27f6332609eb1ef6d398c7855855f2e3
Dataset Creator

	Name:		James Hogan
	Organization:	Florida International University
	Email:		jhogan@fiu.edu

	Name:		Edward Castaneda
	Organization:	Florida International University
	Email:		ecastane@fiu.edu

	Name:		Lukas Lamb-Wotton
	Organization:	Florida International University
	Email:		llamb009@fiu.edu


Dataset Abstract

	
  Rates of leaf gas exchange were measured monthly during the 2019
  calendar year in a scrub Red mangrove (Rhizophora
  mangle (L.) L.) forest site (TS/Ph-7) near the mouth of
  Taylor River in southeastern Florida Everglades. Sampling of green
  mature leaves was designed to target scrub mangrove tree branches
  growing on slightly higher elevation mangrove island centers versus
  permanently inundated island edge habitats. Concurrent measurements of
  water depth and surface and porewater salinity were collected at each
  of the mangrove island habitats, with the research objective of
  assessing the effect of physicochemical variables on rates of leaf gas
  exchange (i.e., assimilation and stomatal conductance). Leaf gas
  exchange data were collected using the Li-6800 portable photosynthesis
  system (Li-COR, Lincoln, NE). Additional data on leaf functional
  traits and nutrient concentrations and environmental data from the
  site are included. Data are presented in five datasets (.csv).



Geographic Coverage


	Bounding Coordinates

		Geographic description:	TS/Ph-7b
		West bounding coordinate:	-80.642
		East bounding coordinate:	-80.642
		North bounding coordinate:	25.197
		South bounding coordinate:	25.197
	



Temporal Coverage

	Start Date:  2019-01-01
	End Date:  2019-12-31


Data Table

	Entity Name:  TaylorSlough7_IslandElevations.csv
	Entity Description:  Data for TaylorSlough7 Island Elevations
	Object Name:  TaylorSlough7_IslandElevations.csv

	Data Format

		Number of Header Lines:  1
		Attribute Orientation:  column
		Field Delimiter:  ,
		Number of Records:  

	Attributes

		Attribute Name:  Plot_ID
		Attribute Label:  
		Attribute Definition:  Plot 1 (located in the interior scrub mangrove zone). Plot 2 (located in the fringe scrub mangrove zone – near shoreline).
		Storage Type:  string
		Measurement Scale: 
			Plot 1 (located in the interior scrub mangrove zone). Plot 2 (located in the fringe scrub mangrove zone – near shoreline).
		Missing Value Code: 


		Attribute Name:  Island
		Attribute Label:  
		Attribute Definition:  "Island number. These are the established treatment pairs (i.e., replicates within plots, four total)"
		Storage Type:  string
		Measurement Scale: 
			"Island number. These are the established treatment pairs (i.e., replicates within plots, four total)"
		Missing Value Code: 


		Attribute Name:  IslandHabitat
		Attribute Label:  
		Attribute Definition:  "Each island is comprised of two habitat treatments (center and edge), which correspond to distinct microhabitats that vary in elevation. The edge is the lower elevation and center is higher. A third habitat is included in this file: open water habitat"
		Storage Type:  string
		Measurement Scale: 
			"Each island is comprised of two habitat treatments (center and edge), which correspond to distinct microhabitats that vary in elevation. The edge is the lower elevation and center is higher. A third habitat is included in this file: open water habitat"
		Missing Value Code: 


		Attribute Name:  northing_NAD83
		Attribute Label:  
		Attribute Definition:  X coordinate in relation to the North American horizontal Datum of 1983
		Storage Type:  float
		Measurement Scale: 
			Units:  meter
			Number Type:  real
		Missing Value Code: 


		Attribute Name:  easting_NAD83
		Attribute Label:  
		Attribute Definition:  Y coordinate in relation to the North American horizontal Datum of 1983 
		Storage Type:  float
		Measurement Scale: 
			Units:  meter
			Number Type:  real
		Missing Value Code: 


		Attribute Name:  vegTyp
		Attribute Label:  
		Attribute Definition:  Vegetation type where measurement was taken.
		Storage Type:  string
		Measurement Scale: 
			sMRh= Red Mangrove
			Wtr= open water
		Missing Value Code: 


		Attribute Name:  elev_NAVD88_m
		Attribute Label:  
		Attribute Definition:  "Soil surface elevation measured via real-time kinematics survey, referenced to the North American vertical Datum 1988"
		Storage Type:  float
		Measurement Scale: 
			Units:  meter
			Number Type:  real
		Missing Value Code: 


		Attribute Name:  soilDpth_m
		Attribute Label:  
		Attribute Definition:  Soil depth to bedrock
		Storage Type:  float
		Measurement Scale: 
			Units:  meter
			Number Type:  real
		Missing Value Code: 


		Attribute Name:  bedrock_NAVD88_m
		Attribute Label:  
		Attribute Definition:  Bedrock elevation referenced to the North American Vertical Datum 1988. Bedrock elevation is computed by subtracting soil depth from soil surface elevation.
		Storage Type:  float
		Measurement Scale: 
			Units:  meter
			Number Type:  real
		Missing Value Code: 




Data Table

	Entity Name:  TaylorSlough7_LeafNutrients.csv
	Entity Description:  Data for TaylorSlough7 Leaf Nutrients
	Object Name:  TaylorSlough7_LeafNutrients.csv

	Data Format

		Number of Header Lines:  1
		Attribute Orientation:  column
		Field Delimiter:  ,
		Number of Records:  

	Attributes

		Attribute Name:  Date
		Attribute Label:  
		Attribute Definition:  Date of measurement
		Storage Type:  date
		Measurement Scale: 
		Missing Value Code: 


		Attribute Name:  Season
		Attribute Label:  
		Attribute Definition:  "Dry or wet based on water year.  The dry season is from November to April, and wet season is from May to October"
		Storage Type:  string
		Measurement Scale: 
			"Dry or wet based on water year.  The dry season is from November to April, and wet season is from May to October"
		Missing Value Code: 


		Attribute Name:  Plot
		Attribute Label:  
		Attribute Definition:  Plot 1 (located in the interior scrub mangrove zone). Plot 2 (located in the fringe scrub mangrove zone – near shoreline).
		Storage Type:  string
		Measurement Scale: 
			Plot 1 (located in the interior scrub mangrove zone). Plot 2 (located in the fringe scrub mangrove zone – near shoreline).
		Missing Value Code: 


		Attribute Name:  Island
		Attribute Label:  
		Attribute Definition:  "Island number. These are the established treatment pairs (i.e., replicates within plots, four total); Numbered 1-4 for each plot"
		Storage Type:  string
		Measurement Scale: 
			"Island number. These are the established treatment pairs (i.e., replicates within plots, four total); Numbered 1-4 for each plot"
		Missing Value Code: 


		Attribute Name:  Trt
		Attribute Label:  
		Attribute Definition:  Unique identifier for each island n = 8; In the form of Plot#_Island#
		Storage Type:  string
		Measurement Scale: 
			Unique identifier for each island n = 8; In the form of Plot#_Island#
		Missing Value Code: 


		Attribute Name:  IslandHabitat
		Attribute Label:  
		Attribute Definition:  "Each island is comprised of two habitat treatments (center and edge), which correspond to distinct microhabitats that vary in elevation. The edge is the lower elevation and center is higher."
		Storage Type:  string
		Measurement Scale: 
			"Each island is comprised of two habitat treatments (center and edge), which correspond to distinct microhabitats that vary in elevation. The edge is the lower elevation and center is higher."
		Missing Value Code: 


		Attribute Name:  Leaf
		Attribute Label:  
		Attribute Definition:  Two factor variable to denote green leaves (Live) from senescent leaves (Senescent)
		Storage Type:  string
		Measurement Scale: 
			Two factor variable to denote green leaves (Live) from senescent leaves (Senescent)
		Missing Value Code: 


		Attribute Name:  Total_Carbon_mgperg
		Attribute Label:  
		Attribute Definition:  Leaf carbon content
		Storage Type:  float
		Measurement Scale: 
			Units:		milligramPerGram
			Number Type:  real
		Missing Value Code: -9999  (not collected)


		Attribute Name:  d13C
		Attribute Label:  
		Attribute Definition:  "Leaf carbon isotopic signature, or the measured ratio of 13C to 12C in parts per thousand (per mille)"
		Storage Type:  float
		Measurement Scale: 
			Units:  permil
			Number Type:  real
		Missing Value Code: -9998  (not collected)


		Attribute Name:  Total_Nitrogen_mgperg
		Attribute Label:  
		Attribute Definition:  Leaf nitrogen concentration
		Storage Type:  float
		Measurement Scale: 
			Units:		milligramPerGram
			Number Type:  real
		Missing Value Code: -9997  (not collected)


		Attribute Name:  d15N
		Attribute Label:  
		Attribute Definition:  "Leaf nitrogen isotopic signature, or the measured ratio of 15N to 14N in parts per thousand (per mille)"
		Storage Type:  float
		Measurement Scale: 
			Units:  permil
			Number Type:  real
		Missing Value Code: -9996  (not collected)


		Attribute Name:  Total_Phosphorus_mgperg
		Attribute Label:  
		Attribute Definition:  Leaf phosphorus concentration
		Storage Type:  float
		Measurement Scale: 
			Units:		milligramPerGram
			Number Type:  real
		Missing Value Code: -9995  (not collected)




Data Table

	Entity Name:  TaylorSlough7_LeafTraits.csv
	Entity Description:  Data for TaylorSlough7 leaf traits
	Object Name:  TaylorSlough7_LeafTraits.csv

	Data Format

		Number of Header Lines:  1
		Attribute Orientation:  column
		Field Delimiter:  ,
		Number of Records:  

	Attributes

		Attribute Name:  Date
		Attribute Label:  
		Attribute Definition:  Date of measurement
		Storage Type:  date
		Measurement Scale: 
		Missing Value Code: 


		Attribute Name:  Season
		Attribute Label:  
		Attribute Definition:  "Dry or wet based on water year.  The dry season is from November to April, and wet season is from May to October"
		Storage Type:  string
		Measurement Scale: 
			"Dry or wet based on water year.  The dry season is from November to April, and wet season is from May to October"
		Missing Value Code: 


		Attribute Name:  Plot
		Attribute Label:  
		Attribute Definition:  Plot 1 (located in the interior scrub mangrove zone). Plot 2 (located in the fringe scrub mangrove zone – near shoreline).
		Storage Type:  string
		Measurement Scale: 
			Plot 1 (located in the interior scrub mangrove zone). Plot 2 (located in the fringe scrub mangrove zone – near shoreline).
		Missing Value Code: 


		Attribute Name:  Island
		Attribute Label:  
		Attribute Definition:  "Island number. These are the established treatment pairs (i.e., replicates within plots, four total); 1 through 4 for each plot"
		Storage Type:  string
		Measurement Scale: 
			"Island number. These are the established treatment pairs (i.e., replicates within plots, four total); 1 through 4 for each plot"
		Missing Value Code: 


		Attribute Name:  Trt
		Attribute Label:  
		Attribute Definition:  Unique identifier for each island n = 8; In the form of Plot# Island#
		Storage Type:  string
		Measurement Scale: 
			Unique identifier for each island n = 8; In the form of Plot# Island#
		Missing Value Code: 


		Attribute Name:  IslandHabitat
		Attribute Label:  
		Attribute Definition:  "Each island is comprised of two habitat treatments (center and edge), which correspond to distinct microhabitats that vary in elevation. The edge is the lower elevation and center is higher."
		Storage Type:  string
		Measurement Scale: 
			"Each island is comprised of two habitat treatments (center and edge), which correspond to distinct microhabitats that vary in elevation. The edge is the lower elevation and center is higher."
		Missing Value Code: 


		Attribute Name:  Leaf
		Attribute Label:  
		Attribute Definition:  Factor variable A – D for each unique green leaf per habitat per sampling period (n=5)
		Storage Type:  string
		Measurement Scale: 
			Factor variable A – D for each unique green leaf per habitat per sampling period (n=5)
		Missing Value Code: 


		Attribute Name:  freshMass_g
		Attribute Label:  
		Attribute Definition:  The fresh mass of the leaf
		Storage Type:  float
		Measurement Scale: 
			Units:  gram
			Number Type:  real
		Missing Value Code: -9999  (Missing)


		Attribute Name:  dryMass_g
		Attribute Label:  
		Attribute Definition:  Leaf dry mass (after oven drying at 60°C for several days)
		Storage Type:  float
		Measurement Scale: 
			Units:  gram
			Number Type:  real
		Missing Value Code: -9999  (Missing)


		Attribute Name:  SLA_cm2perg
		Attribute Label:  
		Attribute Definition:  "Specific leaf area, calculated as the ratio of leaf area to dry mass"
		Storage Type:  float
		Measurement Scale: 
			Units:		squareCentimeterPerGram
			Number Type:  real
		Missing Value Code: -9999  (Missing)


		Attribute Name:  LDMC
		Attribute Label:  
		Attribute Definition:  Leaf dry matter content.  Calculated per Cornelissen et al. 2003 Australian Journal of Botany 51:335-380.
		Storage Type:  float
		Measurement Scale: 
			Units:		milligramPerGram
			Number Type:  real
		Missing Value Code: -9999  (Missing)


		Attribute Name:  LWC
		Attribute Label:  
		Attribute Definition:  Leaf water content.  Calculated per Cornelissen et al. 2003 Australian Journal of Botany 51:335-380.
		Storage Type:  float
		Measurement Scale: 
			Units:  percent
			Number Type:  real
		Missing Value Code: -9999  (Missing)


		Attribute Name:  Area_cm2
		Attribute Label:  
		Attribute Definition:  Leaf area.  Measuring using ImageJ
		Storage Type:  float
		Measurement Scale: 
			Units:  squareCentimeters
			Number Type:  real
		Missing Value Code: -9999  (Missing)


		Attribute Name:  Perimeter_cm
		Attribute Label:  
		Attribute Definition:  Leaf perimeter.  Measured using ImageJ
		Storage Type:  float
		Measurement Scale: 
			Units:  centimeter
			Number Type:  real
		Missing Value Code: -9999  (Missing)


		Attribute Name:  Length_cm
		Attribute Label:  
		Attribute Definition:  Leaf length.  Measured using ImageJ
		Storage Type:  float
		Measurement Scale: 
			Units:  centimeter
			Number Type:  real
		Missing Value Code: -9999  (Missing)


		Attribute Name:  Width_cm
		Attribute Label:  
		Attribute Definition:  Leaf width.  Measured using ImageJ
		Storage Type:  float
		Measurement Scale: 
			Units:  centimeter
			Number Type:  real
		Missing Value Code: -9999  (Missing)




Data Table

	Entity Name:  TaylorSlough7_Water.csv
	Entity Description:  Data for TaylorSlough Water
	Object Name:  TaylorSlough7_Water.csv

	Data Format

		Number of Header Lines:  1
		Attribute Orientation:  column
		Field Delimiter:  ,
		Number of Records:  

	Attributes

		Attribute Name:  Date
		Attribute Label:  
		Attribute Definition:  Date of measurement
		Storage Type:  date
		Measurement Scale: 
		Missing Value Code: 


		Attribute Name:  Season
		Attribute Label:  
		Attribute Definition:  "Dry or wet based on water year.  The dry season is from November to April, and wet season is from May to October"
		Storage Type:  string
		Measurement Scale: 
			"Dry or wet based on water year.  The dry season is from November to April, and wet season is from May to October"
		Missing Value Code: 


		Attribute Name:  Plot
		Attribute Label:  
		Attribute Definition:  Plot 1 (located in the interior scrub mangrove zone). Plot 2 (located in the fringe scrub mangrove zone – near shoreline).
		Storage Type:  string
		Measurement Scale: 
			Plot 1 (located in the interior scrub mangrove zone). Plot 2 (located in the fringe scrub mangrove zone – near shoreline).
		Missing Value Code: 


		Attribute Name:  Island
		Attribute Label:  
		Attribute Definition:  "Island number. These are the established treatment pairs (i.e., replicates within plots, four total); 1-4 for each plot"
		Storage Type:  string
		Measurement Scale: 
			"Island number. These are the established treatment pairs (i.e., replicates within plots, four total); 1-4 for each plot"
		Missing Value Code: 


		Attribute Name:  Trt
		Attribute Label:  
		Attribute Definition:  Unique identifier for each island n = 8; in the form of Plot# Island#
		Storage Type:  string
		Measurement Scale: 
			Unique identifier for each island n = 8; in the form of Plot# Island#
		Missing Value Code: 


		Attribute Name:  IslandHabitat
		Attribute Label:  
		Attribute Definition:  "Each island is comprised of two habitat treatments (center and edge), which correspond to distinct microhabitats that vary in elevation. The edge is the lower elevation and center is higher."
		Storage Type:  string
		Measurement Scale: 
			"Each island is comprised of two habitat treatments (center and edge), which correspond to distinct microhabitats that vary in elevation. The edge is the lower elevation and center is higher."
		Missing Value Code: 


		Attribute Name:  PW_Salinity_ppt
		Attribute Label:  
		Attribute Definition:  Porewater salinity
		Storage Type:  float
		Measurement Scale: 
			Units:		partsPerThousand
			Number Type:  real
		Missing Value Code: -9999  (No water)


		Attribute Name:  PW_temp_celcius
		Attribute Label:  
		Attribute Definition:  Porewater temperature
		Storage Type:  float
		Measurement Scale: 
			Units:  celsius
			Number Type:  real
		Missing Value Code: -9999  (No water)


		Attribute Name:  PW_Spec_Conductivity_uS
		Attribute Label:  
		Attribute Definition:  Porewater specific conductivity
		Storage Type:  float
		Measurement Scale: 
			Units:		microSiemens
			Number Type:  natural
		Missing Value Code: -9999  (No water)


		Attribute Name:  SW_Salinity_ppt
		Attribute Label:  
		Attribute Definition:  Surface water salinity
		Storage Type:  float
		Measurement Scale: 
			Units:		partsPerThousand
			Number Type:  real
		Missing Value Code: -9999  (No water)


		Attribute Name:  SW_temp_celcius
		Attribute Label:  
		Attribute Definition:  Surface water temperature
		Storage Type:  float
		Measurement Scale: 
			Units:  celsius
			Number Type:  real
		Missing Value Code: -9999  (No water)


		Attribute Name:  SW_Spec_Conductivity_uS
		Attribute Label:  
		Attribute Definition:  Surface water specific conductivity
		Storage Type:  float
		Measurement Scale: 
			Units:		microSiemens
			Number Type:  natural
		Missing Value Code: -9999  (No water)


		Attribute Name:  Water_Level_cm
		Attribute Label:  
		Attribute Definition:  "Water level (i.e., depth of water relative to soil surface)"
		Storage Type:  float
		Measurement Scale: 
			Units:  centimeter
			Number Type:  real
		Missing Value Code: -9999  (No water)




Data Table

	Entity Name:  TaylorSlough7_Photosynthesis.csv
	Entity Description:  Data for TaylorSlough7 photosynthesis
	Object Name:  TaylorSlough7_Photosynthesis.csv

	Data Format

		Number of Header Lines:  1
		Attribute Orientation:  column
		Field Delimiter:  ,
		Number of Records:  

	Attributes

		Attribute Name:  Date
		Attribute Label:  
		Attribute Definition:  Date of measurement
		Storage Type:  date
		Measurement Scale: 
		Missing Value Code: 


		Attribute Name:  Time
		Attribute Label:  
		Attribute Definition:  Time
		Storage Type:  date
		Measurement Scale: 
		Missing Value Code: -9999  (data not collected)


		Attribute Name:  Season
		Attribute Label:  
		Attribute Definition:  "Dry or wet based on water year.  The dry season is from November to April, and wet season is from May to October"
		Storage Type:  string
		Measurement Scale: 
			"Dry or wet based on water year.  The dry season is from November to April, and wet season is from May to October"
		Missing Value Code: 


		Attribute Name:  Plot
		Attribute Label:  
		Attribute Definition:  Plot 1 (located in the interior scrub mangrove zone). Plot 2 (located in the fringe scrub mangrove zone – near shoreline).
		Storage Type:  string
		Measurement Scale: 
			Plot 1 (located in the interior scrub mangrove zone). Plot 2 (located in the fringe scrub mangrove zone – near shoreline).
		Missing Value Code: 


		Attribute Name:  Island
		Attribute Label:  
		Attribute Definition:  "Island number. These are the established treatment pairs (i.e. replicates within plots, four total); 1 through 4 for each plot"
		Storage Type:  string
		Measurement Scale: 
			"Island number. These are the established treatment pairs (i.e. replicates within plots, four total); 1 through 4 for each plot"
		Missing Value Code: 


		Attribute Name:  Trt
		Attribute Label:  
		Attribute Definition:  Unique identifier for each island n = 8; in the form Plot#_Island#
		Storage Type:  string
		Measurement Scale: 
			Unique identifier for each island n = 8; in the form Plot#_Island#
		Missing Value Code: 


		Attribute Name:  IslandHabitat
		Attribute Label:  
		Attribute Definition:  "Each island is comprised of two habitat treatments (center and edge), which correspond to distinct microhabitats that vary in elevation. The edge is the lower elevation and center is higher."
		Storage Type:  string
		Measurement Scale: 
			"Each island is comprised of two habitat treatments (center and edge), which correspond to distinct microhabitats that vary in elevation. The edge is the lower elevation and center is higher."
		Missing Value Code: 


		Attribute Name:  Leaf
		Attribute Label:  
		Attribute Definition:  "leaf 1-5, five green leaves randomly selected per sampling period per IslandHabitat."
		Storage Type:  string
		Measurement Scale: 
			"leaf 1-5, five green leaves randomly selected per sampling period per IslandHabitat."
		Missing Value Code: 


		Attribute Name:  wue
		Attribute Label:  
		Attribute Definition:  "photosynthetic instantaneous water use efficiency in mmols CO2 per mol H2O the molar ratio of carbon assimilated per water transpired (i.e. photosynthesis over stomatal conductance : A/gsw/1000), ranges from 0 to 1."
		Storage Type:  float
		Measurement Scale: 
			Units:  millimolePerMole
			Number Type:  real
		Missing Value Code: -9999  (data not collected)


		Attribute Name:  E
		Attribute Label:  
		Attribute Definition:  Transpiration rate (corrected for leaks)
		Storage Type:  float
		Measurement Scale: 
			Units:		MolePerMeterSquaredPerSecond
			Number Type:  real
		Missing Value Code: -9999  (data not collected)


		Attribute Name:  A
		Attribute Label:  
		Attribute Definition:  Assimilation rate (corrected for leaks)
		Storage Type:  float
		Measurement Scale: 
			Units:  micromolePerMeterSquaredPerSecond
			Number Type:  real
		Missing Value Code: -9999  (data not collected)


		Attribute Name:  Ca
		Attribute Label:  
		Attribute Definition:  Ambient CO2 level (in the chamber)
		Storage Type:  float
		Measurement Scale: 
			Units:  micromolePerMole
			Number Type:  real
		Missing Value Code: -9999  (data not collected)


		Attribute Name:  Ci
		Attribute Label:  
		Attribute Definition:  Intercellular CO2 concentration
		Storage Type:  float
		Measurement Scale: 
			Units:  micromolePerMole
			Number Type:  real
		Missing Value Code: -9999  (data not collected)


		Attribute Name:  Pci
		Attribute Label:  
		Attribute Definition:  Pressure of intercellular CO2
		Storage Type:  float
		Measurement Scale: 
			Units:  pascal
			Number Type:  real
		Missing Value Code: -9999  (data not collected)


		Attribute Name:  Pca
		Attribute Label:  
		Attribute Definition:  pressure of chamber CO2
		Storage Type:  float
		Measurement Scale: 
			Units:  pascal
			Number Type:  real
		Missing Value Code: -9999  (data not collected)


		Attribute Name:  gsw
		Attribute Label:  
		Attribute Definition:  Stomatal conductance to water vapor
		Storage Type:  float
		Measurement Scale: 
			Units:		MolePerMeterSquaredPerSecond
			Number Type:  real
		Missing Value Code: -9999  (data not collected)


		Attribute Name:  gbw
		Attribute Label:  
		Attribute Definition:  boundary layer conductance to water vapor
		Storage Type:  float
		Measurement Scale: 
			Units:  micromolePerMeterSquaredPerSecond
			Number Type:  real
		Missing Value Code: -9999  (data not collected)


		Attribute Name:  gtw
		Attribute Label:  
		Attribute Definition:  total conductance to water vapor
		Storage Type:  float
		Measurement Scale: 
			Units:  micromolePerMeterSquaredPerSecond
			Number Type:  real
		Missing Value Code: -9999  (data not collected)


		Attribute Name:  gtc
		Attribute Label:  
		Attribute Definition:  Total conductance to CO2
		Storage Type:  float
		Measurement Scale: 
			Units:		MolePerMeterSquaredPerSecond
			Number Type:  real
		Missing Value Code: -9999  (data not collected)


		Attribute Name:  Rabs
		Attribute Label:  
		Attribute Definition:  Absorbed shortwave radiation
		Storage Type:  float
		Measurement Scale: 
			Units:  wattPerMeterSquared
			Number Type:  real
		Missing Value Code: -9999  (data not collected)


		Attribute Name:  TleafEB
		Attribute Label:  
		Attribute Definition:  Leaf temperature from energy balance
		Storage Type:  float
		Measurement Scale: 
			Units:  celsius
			Number Type:  real
		Missing Value Code: -9999  (data not collected)


		Attribute Name:  TleafCnd
		Attribute Label:  
		Attribute Definition:  Leaf temperature used for gas exchange computations
		Storage Type:  float
		Measurement Scale: 
			Units:  celsius
			Number Type:  real
		Missing Value Code: -9999  (data not collected)


		Attribute Name:  SVPleaf
		Attribute Label:  
		Attribute Definition:  Saturation vapor pressure at leaf temperature
		Storage Type:  float
		Measurement Scale: 
			Units:  kilopascal
			Number Type:  real
		Missing Value Code: -9999  (data not collected)


		Attribute Name:  RHcham
		Attribute Label:  
		Attribute Definition:  Relative humidity in the chamber
		Storage Type:  float
		Measurement Scale: 
			Units:  percent
			Number Type:  real
		Missing Value Code: -9999  (data not collected)


		Attribute Name:  VPcham
		Attribute Label:  
		Attribute Definition:  Vapor pressure in the chamber
		Storage Type:  float
		Measurement Scale: 
			Units:  percent
			Number Type:  real
		Missing Value Code: -9999  (data not collected)


		Attribute Name:  SVPcham
		Attribute Label:  
		Attribute Definition:  Saturation vapor pressure in the chamber
		Storage Type:  float
		Measurement Scale: 
			Units:  kilopascal
			Number Type:  real
		Missing Value Code: -9999  (data not collected)


		Attribute Name:  VPDleaf
		Attribute Label:  
		Attribute Definition:  vapor pressure deficit
		Storage Type:  float
		Measurement Scale: 
			Units:  kilopascal
			Number Type:  real
		Missing Value Code: -9999  (data not collected)


		Attribute Name:  LatHFlux
		Attribute Label:  
		Attribute Definition:  Latent heat flux (L). The latent heat flux is the transpiration rate E converted to watts per square meter
		Storage Type:  float
		Measurement Scale: 
			Units:  wattPerMeterSquared
			Number Type:  real
		Missing Value Code: -9999  (data not collected)


		Attribute Name:  SenHFlux
		Attribute Label:  
		Attribute Definition:  "Sensible heat flux (H). The sensible heat flux is a function of the leaf - air temperature difference Tleaf - Tair, the specific heat capacity of the air cp (29.3 J mol-1 K-1) and the one sided boundary layer conductance for heat transfer of the leaf gbh, which is 0.92 times the boundary layer conductance for water vapor (gbw)"
		Storage Type:  float
		Measurement Scale: 
			Units:  wattPerMeterSquared
			Number Type:  real
		Missing Value Code: -9999  (data not collected)


		Attribute Name:  NetTherm
		Attribute Label:  
		Attribute Definition:  Net thermal balance. The net thermal balance is based on the leaf temperature and the surrounding chamber wall temperature. The total radiation balance (R) computation needs the net thermal balance (R=Rabs+NetTherm).
		Storage Type:  float
		Measurement Scale: 
			Units:  wattPerMeterSquared
			Number Type:  real
		Missing Value Code: -9999  (data not collected)


		Attribute Name:  EBSum
		Attribute Label:  
		Attribute Definition:  "The sum of leaf energy balance, the sum of sensible and latent heat flux and the net thermal balance: Ebsum = L+R+H (see above). EBsum assumes that the three components of the energy balance of a leaf in the chamber (L,R,H) sum to zero "
		Storage Type:  float
		Measurement Scale: 
			Units:  wattPerMeterSquared
			Number Type:  real
		Missing Value Code: -9999  (data not collected)


		Attribute Name:  Qin
		Attribute Label:  
		Attribute Definition:  PPFD incident on the leaf
		Storage Type:  float
		Measurement Scale: 
			Units:  micromolePerMeterSquaredPerSecond
			Number Type:  real
		Missing Value Code: -9999  (data not collected)


		Attribute Name:  Qabs
		Attribute Label:  
		Attribute Definition:  PPFD absorbed by the leaf
		Storage Type:  float
		Measurement Scale: 
			Units:  micromolePerMeterSquaredPerSecond
			Number Type:  real
		Missing Value Code: -9999  (data not collected)


		Attribute Name:  alpha
		Attribute Label:  
		Attribute Definition:  weighted leaf absorption
		Storage Type:  float
		Measurement Scale: 
			Units:  dimensionless
			Number Type:  real
		Missing Value Code: -9999  (data not collected)


		Attribute Name:  convert
		Attribute Label:  
		Attribute Definition:  Weighted conversion from PPFD to W m-2 in J µmol-1
		Storage Type:  float
		Measurement Scale: 
			Units:		joulePerMole
			Number Type:  real
		Missing Value Code: -9999  (data not collected)


		Attribute Name:  CO2_s
		Attribute Label:  
		Attribute Definition:  Sample IRGA CO2 concentration
		Storage Type:  float
		Measurement Scale: 
			Units:  micromolePerMole
			Number Type:  real
		Missing Value Code: -9999  (data not collected)


		Attribute Name:  CO2_r
		Attribute Label:  
		Attribute Definition:  Reference IRGA CO2 concentration
		Storage Type:  float
		Measurement Scale: 
			Units:  micromolePerMole
			Number Type:  real
		Missing Value Code: -9999  (data not collected)


		Attribute Name:  H2O_s
		Attribute Label:  
		Attribute Definition:  Sample IRGA H2O concentration
		Storage Type:  float
		Measurement Scale: 
			Units:  millimolePerMole
			Number Type:  real
		Missing Value Code: -9999  (data not collected)


		Attribute Name:  H2O_r
		Attribute Label:  
		Attribute Definition:  Reference IRGA H2O concentration
		Storage Type:  float
		Measurement Scale: 
			Units:  millimolePerMole
			Number Type:  real
		Missing Value Code: -9999  (data not collected)


		Attribute Name:  Flow
		Attribute Label:  
		Attribute Definition:  Flow rate of air to chamber
		Storage Type:  float
		Measurement Scale: 
			Units:		micromolePerSecond
			Number Type:  real
		Missing Value Code: -9999  (data not collected)


		Attribute Name:  Pa
		Attribute Label:  
		Attribute Definition:  Atmospheric pressure
		Storage Type:  float
		Measurement Scale: 
			Units:  kilopascal
			Number Type:  real
		Missing Value Code: -9999  (data not collected)


		Attribute Name:  DeltaPcham
		Attribute Label:  
		Attribute Definition:  Chamber overpressure
		Storage Type:  float
		Measurement Scale: 
			Units:  kilopascal
			Number Type:  real
		Missing Value Code: -9999  (data not collected)


		Attribute Name:  Tair
		Attribute Label:  
		Attribute Definition:  Chamber air temperature in
		Storage Type:  float
		Measurement Scale: 
			Units:  celsius
			Number Type:  real
		Missing Value Code: -9999  (data not collected)


		Attribute Name:  Tleaf
		Attribute Label:  
		Attribute Definition:  Temperature measured by leaf thermocouple
		Storage Type:  float
		Measurement Scale: 
			Units:  celsius
			Number Type:  real
		Missing Value Code: -9999  (data not collected)


		Attribute Name:  Fan_speed
		Attribute Label:  
		Attribute Definition:  Chamber fan rotation rate
		Storage Type:  float
		Measurement Scale: 
			Units:		revolutionPerMinute
			Number Type:  real
		Missing Value Code: -9999  (data not collected)


		Attribute Name:  Qamb_out
		Attribute Label:  
		Attribute Definition:  External quantum sensor light (PAR)
		Storage Type:  float
		Measurement Scale: 
			Units:  micromolePerMeterSquaredPerSecond
			Number Type:  real
		Missing Value Code: -9999  (data not collected)


		Attribute Name:  Stability_State
		Attribute Label:  
		Attribute Definition:  "fraction of stability criteria met when data point was logged; The stability criteria (5) for the logging of data points with Li-6800 were as follows (note: Std = standard deviation, Slp = slope): deltaH2O (Meas2): Slp<1, Ci (GasEx): Slp<5,  A (GasEx): Slp<1, gsw (GasEx): Slp<0.5, E (GasEx): Std<1, all of which were assessed over a 15s interval."
		Storage Type:  string
		Measurement Scale: 
			"fraction of stability criteria met when data point was logged; The stability criteria (5) for the logging of data points with Li-6800 were as follows (note: Std = standard deviation, Slp = slope): deltaH2O (Meas2): Slp<1, Ci (GasEx): Slp<5,  A (GasEx): Slp<1, gsw (GasEx): Slp<0.5, E (GasEx): Std<1, all of which were assessed over a 15s interval."
		Missing Value Code: -9999  (data not collected)




Methods



	Method Step 

		Description 

			
  All measurements were collected at site TS/Ph-7 in the Florida Coastal
  Everglades (FCE) LTER. TS/Ph-7 is located approximately 1.5 km inland
  from the mouth of Taylor River in southeastern FCE. Duplicate mangrove
  vegetation plots (20 x 20 m) were established in December 2000
  perpendicular to the shoreline (i.e., Taylor River) at 50 and 90 m in
  the fringe and interior scrub red mangrove-dominated zones,
  respectively, to monitor forest structural attributes, productivity,
  and soil biogeochemical properties. The mangrove forests at TS/Ph-7
  are classified as scrub mangroves, because phosphorus limitation and
  permanent flooding constrain mangrove forest growth and development.

			
  Due to the stunted physiognomy of the forest at TS/Ph-7, eight
  distinct mangrove islands of similar size (3-5 m in diameter) were
  selected and treated as experimental units for repeated measurements
  of leaf photosynthesis and physicochemical variables from January to
  December 2019. Mangrove islands were selected within the permanent
  vegetation plots based on their location relative to the shoreline
  (i.e., Taylor River), with four islands located in the fringe mangrove
  zone (~50-60 m from the edge) and four islands located in the interior
  forest (~100-110 m inland; Figure 1). Mangrove islands are
  characterized by a distinct elevation gradient, with higher soil
  elevation at the center of islands and lower elevation range at the
  edge of islands. Differences in elevation between center and edge
  habitats of the mangrove islands averaged 30 cm. Soil surface
  elevation at each habitat was measured using real-time kinematics
  referenced to the NAVD88 datum with a Trimble R8 high precision GPS
  system ( Trimble, Sunnyvale, CA).

			
  Water levels relative to the soil surface were measured monthly with a
  meter stick at each of the permanent aluminum rods established at all
  island habitats. A porewater sample was collected at 30 cm depth at
  each habitat using a 60 ml syringe attached to a stopcock and a rigid
  tubing probe (3/16” diameter). Porewater temperature and salinity were
  measured using a handheld YSI conductivity-salinity-temperature meter
  (model Pro 30, YSI Incorporated, Yellow Springs, OH). A sample of
  surface water (when present) was also collected at each island habitat
  to measure salinity and temperature.

			
  Leaf gas exchange data were collected monthly using the Li-6800
  portable gas exchange system (Li-COR Inc., Lincoln, NE). During each
  sampling date, five mature green leaves were randomly selected from
  top mangrove branches. Fully developed and healthy (i.e., without
  herbivory) green leaves from the second-most distal pair of leaves on
  the leaf rosette were chosen. The Li-6800 was clamped onto each leaf
  and held until machine stability was reached, wherein data points were
  logged. During each sampling date, five leaves per habitat type were
  randomly chosen from the second-most terminal leaf pair on the leaf
  rosette in order to control for leaf ontogeny. The Li-6800 was clamped
  on the leaf and allowed to stabilize before logging data points.
  Eighty measurements were taken per sampling period with the
  environmental set up / machine configuration as follows: Flow -
  automatic at high (~1500 µmols s-1),
  H2O_r - set to RHair
  (which varied between 50-70%), CO2_r - 400 ppm,
  Fan - automatic (high), Air temperature - set to
  Tair, Light (Qin) – set
  to 1000 µmols m-2
  s-1 (which was determined to be
  non-limiting based on data from a quantum senor on a eddy co-variance
  tower at the TS/Ph-7). The stability criteria (5) for the logging of
  data points with Li-6800 were as follows (note: Std = standard
  deviation, Slp = slope): deltaH2O (Meas2):
  Slp<1, Ci (GasEx): Slp<5, A (GasEx):
  Slp<1, gsw (GasEx): Slp<0.5, E (GasEx):
  Std<1, all of which were assessed over a 15s interval.

			
  Leaves were collected every three months and analyzed for
  morphological traits and tissue nutrients. Leaf morphological data
  were measured by scanning leaves and recording their fresh and dry
  weights. Scanned images were processed in imageJ for morphological
  parameters. Leaf total carbon and nitrogen content were determined for
  homogenized leaf tissue samples with a NA1500 elemental analyzer
  (Fisons Instruments, Inc., Danvers, MA). Total phosphorus (TP) was
  extracted using an acid-digested (HCl) extraction, and concentrations
  of soluble reactive P were determined by colorimetric analysis. Leaf C
  and N bulk isotopic signatures (δ13C,
  δ15N) were analyzed on a Thermo Scientific
  Delta V Plus CF-IRMS coupled to an 1108 elemental analyzer via a
  ConFlo IV interface (Thermo Fisher, Waltham, MA).



Dataset Contact

	Name:		James Hogan
	Organization:	Florida International University
	Email:		jhogan@fiu.edu